RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 YJEFN3A6XGL0 299 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 E7ENQ6 273 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 FECHP22830 423 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 MMP8P22894 467 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 SP100P23497 879 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 GABRB2P47870 512 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 GFPT1Q06210 699 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 TAF5Q15542 800 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 ACAD10Q6JQN1 1059 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 MON1BQ7L1V2 547 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 PHLDB2Q86SQ0 1253 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 ERICH1Q86X53 443 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 XYLT1Q86Y38 959 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 TMEM139Q8IV31 216 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 NPAS3Q8IXF0 933 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 ST13P5Q8NFI4 369 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 ZSWIM3Q96MP5 696 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 SLITRK1Q96PX8 696 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 SLC22A12Q96S37 553 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 MYADMQ96S97 322 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 NHEJ1Q9H9Q4 299 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 CYLDQ9NQC7 956 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 CNGB3Q9NQW8 809 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 ZNHIT6Q9NWK9 470 aaKnown RBP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 UXTQ9UBK9 157 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-209ENST00000469852 CDC25CP30307 473 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 ACADSBP45954 432 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 NSFP46459 744 aaKnown RBP15.53■□□□□ 0.08
COL9A3-209ENST00000469852 CDK17Q00537 523 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 SMAD2Q15796 467 aaKnown RBP15.53■□□□□ 0.08
COL9A3-209ENST00000469852 TSR1Q2NL82 804 aaKnown RBP15.53■□□□□ 0.08
COL9A3-209ENST00000469852 TXNDC8Q6A555 127 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 OLFML1Q6UWY5 402 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 PHF13Q86YI8 300 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-209ENST00000469852 SCML4Q8N228 414 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 LEMD2Q8NC56 503 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 FGF13Q92913 245 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 KHSRPQ92945 711 aaKnown RBP eCLIP15.53■□□□□ 0.08
COL9A3-209ENST00000469852 NOX5Q96PH1 765 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 CCSER2Q9H7U1 834 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 SPTLC3Q9NUV7 552 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 TRPM5Q9NZQ8 1165 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 NUDT5Q9UKK9 219 aa15.53■□□□□ 0.08
COL9A3-209ENST00000469852 SSU72P8A0A1W2PR75 194 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 SOWAHDA6NJG2 315 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 ZNF197O14709 1029 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 ZNF263O14978 683 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 GJB6O95452 261 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 ABL1P00519 1130 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 YWHAGP61981 247 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL9A3-209ENST00000469852 MTF1Q14872 753 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 GPR158Q5T848 1215 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 OR6B2Q6IFH4 312 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 MCOLN2Q8IZK6 566 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 PDZD8Q8NEN9 1154 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 IPO4Q8TEX9 1081 aaKnown RBP15.52■□□□□ 0.08
COL9A3-209ENST00000469852 OVCA2Q8WZ82 227 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 C18orf8Q96DM3 657 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 MCRS1Q96EZ8 462 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 PDLIM2Q96JY6 352 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 NECTIN4Q96NY8 510 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 CYP2S1Q96SQ9 504 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 SLC46A2Q9BY10 475 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 SYNCQ9H7C4 482 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 TRPC7Q9HCX4 862 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 EHD2Q9NZN4 543 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 ADAM22Q9P0K1 906 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 NAGPAQ9UK23 515 aa15.52■□□□□ 0.08
COL9A3-209ENST00000469852 HELZP42694 1942 aaKnown RBP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 NUP210Q8TEM1 1887 aaPredicted RBP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 GOLGA8SH3BPF8 625 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 MDM4O15151 490 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 ATMINO43313 823 aaPredicted RBP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 GRAP2O75791 330 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 FBXO21O94952 628 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 FGF19O95750 216 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 TBX18O95935 607 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 OAS1P00973 400 aaKnown RBP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 FYNP06241 537 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 GZMAP12544 262 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 SLC18A3Q16572 532 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 AAK1Q2M2I8 961 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 RAD9BQ6WBX8 426 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 MON1AQ86VX9 555 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 MAB21L3Q8N8X9 362 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 IRGQQ8WZA9 623 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 EDEM1Q92611 657 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 MRPS31Q92665 395 aaKnown RBP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 GCNAQ96QF7 691 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 PACSIN1Q9BY11 444 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 RNF38Q9H0F5 515 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 SMG9Q9H0W8 520 aaKnown RBP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 ISCUQ9H1K1 167 aa15.51■□□□□ 0.07
COL9A3-209ENST00000469852 TLR8Q9NR97 1041 aaKnown RBP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL9A3-209ENST00000469852 TCRBV5S1A1TA0A578 114 aa15.5■□□□□ 0.07
COL9A3-209ENST00000469852 C2CD4DB7Z1M9 353 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms