RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CEP350Q5VT06 3117 aa15.3■□□□□ 0.04
CBWD3-205ENST00000469687 TCRBV9S1A1TA0A576 114 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 IGF2BP3O00425 579 aaKnown RBP eCLIP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 AKAP5P24588 427 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 MSH2P43246 934 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 HDAC4P56524 1084 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 SLC6A3Q01959 620 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 PPP6R3Q5H9R7 873 aaPredicted RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 HHATQ5VTY9 493 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 DPP9Q86TI2 863 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 C7orf31Q8N865 590 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 OR6J1Q8NGC5 347 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 MS4A4AQ96JQ5 239 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 SNX27Q96L92 541 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 SLC4A5Q9BY07 1137 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 KIAA1257Q9ULG3 409 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 STARD13Q9Y3M8 1113 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 TEX264Q9Y6I9 313 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 MYO18AQ92614 2054 aaKnown RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 EDF1O60869 148 aaKnown RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 GPR32O75388 356 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 CCDC130P13994 396 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 NQO1P15559 274 aaKnown RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 SDC4P31431 198 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 STIP1P31948 543 aaKnown RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 GTF2A1P52655 376 aaPredicted RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 YARSP54577 528 aaKnown RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 ACVR2BQ13705 512 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 TFDP2Q14188 446 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 SOWAHAQ2M3V2 549 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 KLHL38Q2WGJ6 581 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 KBTBD12Q3ZCT8 623 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 FAM47CQ5HY64 1035 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 ZNF618Q5T7W0 954 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 CATSPER4Q7RTX7 472 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 TMEM110Q86TL2 294 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 ZNF410Q86VK4 478 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 TCP10LQ8TDR4 215 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 LRRC8CQ8TDW0 803 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 ZC3H15Q8WU90 426 aaKnown RBP15.29■□□□□ 0.04
CBWD3-205ENST00000469687 MYLK2Q9H1R3 596 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 PPCSQ9HAB8 311 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 FETUBQ9UGM5 382 aa15.29■□□□□ 0.04
CBWD3-205ENST00000469687 DPYSL4O14531 572 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 APOL1O14791 398 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 CHUKO15111 745 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 ATP6V1G2O95670 118 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 PDGFRBP09619 1106 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 RDXP35241 583 aaKnown RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 YWHAGP61981 247 aaKnown RBP eCLIP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 ZBTB6Q15916 424 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 RGS9BPQ6ZS82 235 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 GPR142Q7Z601 462 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 PRPF39Q86UA1 669 aaKnown RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 NT5DC4Q86YG4 428 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 GRAMD1AQ96CP6 724 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 MAML3Q96JK9 1138 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 ALG13Q9NP73 1137 aaKnown RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 KLK14Q9P0G3 267 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 BAIAP2L1Q9UHR4 511 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 CCL15-CCL14A0A0B4J2E2 113 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 A8MUI8 341 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 FAM155BO75949 473 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 KRT16P08779 473 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 LMO2P25791 158 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 ADORA2BP29275 332 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 BCAR1P56945 870 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 YWHAZP63104 245 aaKnown RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 HIC1Q14526 733 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 CCL15Q16663 113 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 DCAF4L1Q3SXM0 396 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 OTOAQ7RTW8 1153 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 ZNF276Q8N554 614 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 GBP7Q8N8V2 638 aaPredicted RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 BANPQ8N9N5 519 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 NPLOC4Q8TAT6 608 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 CCDC110Q8TBZ0 833 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 BRI3BPQ8WY22 251 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 ZNF75CPQ92670 426 aaPredicted RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 LENG1Q96BZ8 264 aaPredicted RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 KLHL29Q96CT2 875 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 CFAP36Q96G28 342 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 SERAC1Q96JX3 654 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 TRIM56Q9BRZ2 755 aaKnown RBP15.28■□□□□ 0.04
CBWD3-205ENST00000469687 CHKBQ9Y259 395 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 NR2E3Q9Y5X4 410 aa15.28■□□□□ 0.04
CBWD3-205ENST00000469687 CFAP73A6NFT4 308 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 A8MXQ7 604 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 RECQL4O94761 1208 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 HOXD8P13378 290 aaPredicted RBP15.27■□□□□ 0.04
CBWD3-205ENST00000469687 PDK2Q15119 407 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 STILQ15468 1287 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 DGKDQ16760 1214 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 BOLA3Q53S33 107 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 PRAMEF19Q5SWL8 479 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 C9orf57Q5W0N0 161 aa15.27■□□□□ 0.04
CBWD3-205ENST00000469687 SLC9A4Q6AI14 798 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms