RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ZNF518BQ9C0D4 1074 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 ELOVL4Q9GZR5 314 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 DPEP3Q9H4B8 488 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 PCIF1Q9H4Z3 704 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 PPP4R2Q9NY27 417 aa12.97□□□□□ -0.33
UBR4-211ENST00000467272 SRPRBQ9Y5M8 271 aaKnown RBP12.97□□□□□ -0.33
UBR4-211ENST00000467272 H3BQV1 296 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 CFIP05156 583 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 NDUFV2P19404 249 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 NTSR1P30989 418 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 SCAPQ12770 1279 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 RABEP1Q15276 862 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 TDRD10Q5VZ19 366 aaKnown RBP12.96□□□□□ -0.33
UBR4-211ENST00000467272 DBX2Q6ZNG2 339 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 SV2BQ7L1I2 683 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 EPM2AIP1Q7L775 607 aaPredicted RBP12.96□□□□□ -0.33
UBR4-211ENST00000467272 TRMT11Q7Z4G4 463 aaKnown RBP12.96□□□□□ -0.33
UBR4-211ENST00000467272 BBS7Q8IWZ6 715 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 NUP93Q8N1F7 819 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.33
UBR4-211ENST00000467272 ANKRD36BP1Q96IX9 119 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 CAMK1GQ96NX5 476 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 SLITRK1Q96PX8 696 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 SPHK2Q9NRA0 654 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 MARK1Q9P0L2 795 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBR4-211ENST00000467272 DEC1Q9P2X7 70 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 NFE2L3Q9Y4A8 694 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 CLIC4Q9Y696 253 aa12.96□□□□□ -0.33
UBR4-211ENST00000467272 TENM4Q6N022 2769 aa12.96□□□□□ -0.34
UBR4-211ENST00000467272 TBC1D3BA6NDS4 549 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 TGFB1I1O43294 461 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 SH3BP5O60239 455 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 CACNG3O60359 315 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 ZNF217O75362 1048 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 PRPF6O94906 941 aaKnown RBP12.95□□□□□ -0.34
UBR4-211ENST00000467272 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 C7P10643 843 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 MBL2P11226 248 aaPredicted RBP12.95□□□□□ -0.34
UBR4-211ENST00000467272 YWHAQP27348 245 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 SURF1Q15526 300 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 TRIP6Q15654 476 aaKnown RBP12.95□□□□□ -0.34
UBR4-211ENST00000467272 HECTD3Q5T447 861 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 EGFLAMQ63HQ2 1017 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 HTR3DQ70Z44 454 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 METTL3Q86U44 580 aaKnown RBP12.95□□□□□ -0.34
UBR4-211ENST00000467272 HDDC3Q8N4P3 179 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 DEFB119Q8N690 84 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 B3GALNT2Q8NCR0 500 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 PDZD8Q8NEN9 1154 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 RASSF8Q8NHQ8 419 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 SCAMP5Q8TAC9 235 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 BAHD1Q8TBE0 780 aaPredicted RBP12.95□□□□□ -0.34
UBR4-211ENST00000467272 DNASE2BQ8WZ79 361 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 CLIC6Q96NY7 704 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 KCNK16Q96T55 309 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
UBR4-211ENST00000467272 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 CD93Q9NPY3 652 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 HSPBP1Q9NZL4 362 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 KIAA1522Q9P206 1035 aaPredicted RBP12.95□□□□□ -0.34
UBR4-211ENST00000467272 DKK4Q9UBT3 224 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
UBR4-211ENST00000467272 MAST4O15021 2626 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 MYO18AQ92614 2054 aaKnown RBP12.94□□□□□ -0.34
UBR4-211ENST00000467272 MYOFQ9NZM1 2061 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 PRRT4C9JH25 899 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 CLDN5O00501 218 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 RTN3O95197 1032 aaPredicted RBP12.94□□□□□ -0.34
UBR4-211ENST00000467272 TNNC2P02585 160 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 FTH1P19P0C7X4 201 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 HOXB2P14652 356 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 ENPP2Q13822 863 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 PSMD6Q15008 389 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 C10orf76Q5T2E6 689 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 RRAGBQ5VZM2 374 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 LARP1BQ659C4 914 aaKnown RBP12.94□□□□□ -0.34
UBR4-211ENST00000467272 SLCO6A1Q86UG4 719 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 SYCP3Q8IZU3 236 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 NAT16Q8N8M0 369 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 TRIML1Q8N9V2 468 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 ZMIZ2Q8NF64 920 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 IPO4Q8TEX9 1081 aaKnown RBP12.94□□□□□ -0.34
UBR4-211ENST00000467272 MRGPRX1Q96LB2 322 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 HSPA12BQ96MM6 686 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 TRIM9Q9C026 710 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 PANK4Q9NVE7 773 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 TOR4AQ9NXH8 423 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 CCDC39Q9UFE4 941 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 CHORDC1Q9UHD1 332 aaPredicted RBP12.94□□□□□ -0.34
UBR4-211ENST00000467272 ADAMTS20P59510 1910 aa12.94□□□□□ -0.34
UBR4-211ENST00000467272 GFRA2O00451 464 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 SYPP08247 313 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 SLC5A3P53794 718 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms