RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 HOXD13P35453 343 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CXCL12P48061 93 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 GPR15P49685 360 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 KPNA1P52294 538 aaPredicted RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 NRLP54845 237 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 NLRP12P59046 1061 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 RBP5P82980 135 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 MYL7Q01449 175 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 SATB1Q01826 763 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 TNK2Q07912 1038 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 BFSP1Q12934 665 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CCINQ13939 588 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 LRRC32Q14392 662 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 PPP2R5DQ14738 602 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 TAF12Q16514 161 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 OCLNQ16625 522 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CCDC142Q17RM4 750 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 SDHAF4Q5VUM1 108 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 CNNM4Q6P4Q7 775 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CBWD2Q8IUF1 395 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 ADGRF2Q8IZF7 708 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CMTM8Q8IZV2 173 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 TMEM86AQ8N2M4 240 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 SPEM1Q8N4L4 309 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CSGALNACT2Q8N6G5 542 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 TOP6BLQ8N6T0 577 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CELF5Q8N6W0 485 aaKnown RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 STKLD1Q8NE28 680 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 NOC3LQ8WTT2 800 aaKnown RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 ANKRD36BP1Q96IX9 119 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 ZNF396Q96N95 335 aaPredicted RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 PI4K2AQ9BTU6 479 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 CUEDC2Q9H467 287 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 ABCB6Q9NP58 842 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 RBM12Q9NTZ6 932 aaKnown RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 DDX43Q9NXZ2 648 aaKnown RBP7.55□□□□□ -1.2
SND1-205ENST00000467238 HSPBP1Q9NZL4 362 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 NCDNQ9UBB6 729 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 CCL26Q9Y258 94 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 SNX9Q9Y5X1 595 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 USP3Q9Y6I4 520 aa7.55□□□□□ -1.2
SND1-205ENST00000467238 ZFYVE26Q68DK2 2539 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 CFAP47Q6ZTR5 3102 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 WDFY3Q8IZQ1 3526 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 ANKRD11Q6UB99 2663 aaPredicted RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 A0A1W2PNR3 127 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 ZNF233A6NK53 670 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 K7ESF4 209 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 EIF3DO15371 548 aaKnown RBP eCLIP7.54□□□□□ -1.2
SND1-205ENST00000467238 HCRTO43612 131 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 CUTAO60888 179 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 NOL4O94818 638 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 YEATS4O95619 227 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 KRT19P08727 400 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 FAM157BP0CG42 384 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 TGM1P22735 817 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 PCSK1P29120 753 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 AVPR1AP37288 418 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 LHX1P48742 406 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 RPL10AP62906 217 aaKnown RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 ASIC1P78348 528 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 AMPD3Q01432 767 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 EHHADHQ08426 723 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 PUM1Q14671 1186 aaKnown RBP eCLIP7.54□□□□□ -1.2
SND1-205ENST00000467238 PON2Q15165 354 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 SURF1Q15526 300 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 DDR2Q16832 855 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 SOWAHAQ2M3V2 549 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 ITPRIPL2Q3MIP1 535 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 CFAP221Q4G0U5 840 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 DGKKQ5KSL6 1271 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 FAM26FQ5R3K3 315 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 SAMD5Q5TGI4 173 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 TXNDC8Q6A555 127 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 FAM171BQ6P995 826 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 SHC4Q6S5L8 630 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 Q6ZS52 159 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 STXBP4Q6ZWJ1 553 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 EPM2AIP1Q7L775 607 aaPredicted RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 DPH6Q7L8W6 267 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 MAB21L3Q8N8X9 362 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 OR5B17Q8NGF7 314 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 TTC8Q8TAM2 541 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 RIN3Q8TB24 985 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 KBTBD7Q8WVZ9 684 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 MRPS31Q92665 395 aaKnown RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 USP13Q92995 863 aaPredicted RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 SNX21Q969T3 373 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 DHX58Q96C10 678 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 CHFRQ96EP1 664 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 TRMT2BQ96GJ1 504 aaKnown RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 FUBP3Q96I24 572 aaKnown RBP eCLIP7.54□□□□□ -1.2
SND1-205ENST00000467238 MYRFLQ96LU7 910 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 LRRC27Q9C0I9 530 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms