RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CLIC5Q9NZA1 410 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 TRPM5Q9NZQ8 1165 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 ADAM22Q9P0K1 906 aa15.96■□□□□ 0.15
NPHP4-205ENST00000466897 MAGED2Q9UNF1 606 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-205ENST00000466897 XIRP2A4UGR9 3374 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 ZNF840PA6NDX5 716 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 EIF3CLB5ME19 914 aaKnown RBP15.95■□□□□ 0.14
NPHP4-205ENST00000466897 FTLP02792 175 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-205ENST00000466897 USP17L7P0C7H9 530 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 KCNA5P22460 613 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 DDX6P26196 483 aaKnown RBP eCLIP15.95■□□□□ 0.14
NPHP4-205ENST00000466897 GABRR2P28476 465 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 GFPT1Q06210 699 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-205ENST00000466897 PUS10Q3MIT2 529 aaKnown RBP15.95■□□□□ 0.14
NPHP4-205ENST00000466897 MMS22LQ6ZRQ5 1243 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 EP400NLQ6ZTU2 488 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 SLC26A9Q7LBE3 791 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 XYLT1Q86Y38 959 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 SCUBE3Q8IX30 993 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 MCOLN2Q8IZK6 566 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 HS6ST3Q8IZP7 471 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 MCRS1Q96EZ8 462 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 EIF3CQ99613 913 aaKnown RBP15.95■□□□□ 0.14
NPHP4-205ENST00000466897 C11orf70Q9BRQ4 267 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 TJP2Q9UDY2 1190 aa15.95■□□□□ 0.14
NPHP4-205ENST00000466897 TCRBV5S1A1TA0A578 114 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 SOWAHDA6NJG2 315 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 NRDCO43847 1150 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 MOSPD3O75425 235 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 CCR2P41597 374 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 SLC6A3Q01959 620 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 IFRD2Q12894 506 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-205ENST00000466897 CBX2Q14781 532 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-205ENST00000466897 SLC5A9Q2M3M2 681 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 EFHC1Q5JVL4 640 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 CCDC122Q5T0U0 273 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 KLHDC10Q6PID8 442 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 FAM183BPQ6ZVS7 135 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 SCD5Q86SK9 330 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 C3orf20Q8ND61 904 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 SHKBP1Q8TBC3 707 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 FEZF2Q8TBJ5 459 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 PPM1EQ8WY54 764 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 CDK5RAP1Q96SZ6 601 aaKnown RBP15.94■□□□□ 0.14
NPHP4-205ENST00000466897 GMIPQ9P107 970 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 INTUQ9ULD6 942 aa15.94■□□□□ 0.14
NPHP4-205ENST00000466897 USP15Q9Y4E8 981 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-205ENST00000466897 ANKRD62A6NC57 917 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 YJEFN3A6XGL0 299 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 E7ENQ6 273 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 H3BQ06 376 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 ARHGAP6O43182 974 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 MBTPS2O43462 519 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 HSF2BPO75031 334 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 NDUFA10O95299 355 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 OLFM2O95897 454 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 LTFP02788 710 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 MYL4P12829 197 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 FSHRP23945 695 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 WEE1P30291 646 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 YWHAGP61981 247 aaKnown RBP eCLIP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 NTHL1P78549 312 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 OR6B2Q6IFH4 312 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 TADA2BQ86TJ2 420 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 CLEC4CQ8WTT0 213 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 MRPS31Q92665 395 aaKnown RBP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 GOLGA1Q92805 767 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 APOL5Q9BWW9 433 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 LUC7LQ9NQ29 371 aaKnown RBP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 ABCC13Q9NSE7 274 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 SPTLC3Q9NUV7 552 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 MRPS23Q9Y3D9 190 aaKnown RBP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 EPN1Q9Y6I3 576 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 ZFP37Q9Y6Q3 630 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 PRUNE2Q8WUY3 3088 aa15.93■□□□□ 0.14
NPHP4-205ENST00000466897 KIF26AQ9ULI4 1882 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-205ENST00000466897 A0A1W2PQH9 124 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 A0A1W2PRU2 124 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 GRXCR2A6NFK2 248 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 TMCO5BA8MYB1 307 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 PIK3R2O00459 728 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 ZNF263O14978 683 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 IPO7O95373 1038 aaKnown RBP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 OAS1P00973 400 aaKnown RBP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 YWHAZP63104 245 aaKnown RBP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 CCZ1BP86790 482 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 CCZ1P86791 482 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 SPA17Q15506 151 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 ARHGAP15Q53QZ3 475 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 BSPRYQ5W0U4 402 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 PLEKHA7Q6IQ23 1121 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 RAD9BQ6WBX8 426 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 KHSRPQ92945 711 aaKnown RBP eCLIP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 TCEAL4Q96EI5 215 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 SLC2A13Q96QE2 648 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 ATXN3LQ9H3M9 355 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 TASP1Q9H6P5 420 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 NMUR1Q9HB89 426 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 POPDC2Q9HBU9 364 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms