RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 STIP1P31948 543 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 CCNFP41002 786 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 ALDH18A1P54886 795 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 ARHGAP8P85298 464 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 ROR1Q01973 937 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 DSG1Q02413 1049 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 MAP3K10Q02779 954 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 CDC16Q13042 620 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 DARS2Q6PI48 645 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 CPXM1Q96SM3 734 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 SLC13A1Q9BZW2 595 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 FAM192AQ9GZU8 254 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 DHX33Q9H6R0 707 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 POPDC2Q9HBU9 364 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 PCMTD2Q9NV79 361 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 BUD23O43709 281 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 CIB2O75838 187 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 SUPT20HL2P0C7V6 817 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 ASPAP45381 313 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 RPS6KA3P51812 740 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 UBAP2LQ14157 1087 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 NOMO1Q15155 1222 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 SUPT20HL1Q3ZLR7 823 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 C1orf146Q5VVC0 180 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 ATG16L1Q676U5 607 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 XYLT1Q86Y38 959 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 WDR49Q8IV35 697 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 FAF2Q96CS3 445 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 PEBP4Q96S96 227 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 EBF4Q9BQW3 602 aa13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 HBS1LQ9Y450 684 aaKnown RBP13.51□□□□□ -0.25
PDZRN3-205ENST00000466780 A0A1B0GVG6 124 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 SNNO75324 88 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 KRT37O76014 449 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 BAG2O95816 211 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 TRUB2O95900 331 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 ERBB2P04626 1255 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 CPOXP36551 454 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 AP2B1P63010 937 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 DNAL1Q4LDG9 190 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 ZBTB33Q86T24 672 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 EGFL6Q8IUX8 553 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 TRIM42Q8IWZ5 723 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 USP29Q9HBJ7 922 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 DNAJB4Q9UDY4 337 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 KCNG1Q9UIX4 513 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 ZNF180Q9UJW8 692 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 CTDP1Q9Y5B0 961 aaPredicted RBP13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 A0A088AWK7 358 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 HMX2A2RU54 273 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 MEI4A8MW99 385 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 VWA5AO00534 786 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 CHADO15335 359 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RNASEH1O60930 286 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RNF8O76064 485 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 CD19P15391 556 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 PRKCHP24723 683 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 YWHAEP62258 255 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RAB6CQ53S08 254 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 FAXCQ5TGI0 409 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 TMCO4Q5TGY1 634 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 FKBP1CQ5VVH2 108 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RAPH1Q70E73 1250 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 NUDCD3Q8IVD9 361 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RTKN2Q8IZC4 609 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RNF217Q8TC41 542 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 ATG4CQ96DT6 458 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 TRIM56Q9BRZ2 755 aaKnown RBP13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RAB6CQ9H0N0 254 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 GPAMQ9HCL2 828 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 RAB6BQ9NRW1 208 aa13.5□□□□□ -0.25
PDZRN3-205ENST00000466780 CSH1P0DML2 217 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 CSH2P0DML3 217 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 POLR2BP30876 1174 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 SP2Q02086 613 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 CDK18Q07002 472 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 CBLBQ13191 982 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 CAPSQ13938 189 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 C6orf163Q5TEZ5 329 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 KYAT3Q6YP21 454 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 RNF111Q6ZNA4 994 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 ZCCHC23Q6ZST2 131 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 CYP4V2Q6ZWL3 525 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 FAM83AQ86UY5 434 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 CAND1Q86VP6 1230 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 XYLT2Q9H1B5 865 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 LHX5Q9H2C1 402 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 EBF3Q9H4W6 596 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 MKS1Q9NXB0 559 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 ZC3H7BQ9UGR2 993 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 USP18Q9UMW8 372 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 PSME4Q14997 1843 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 SRCAPQ6ZRS2 3230 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 ENDOD1O94919 500 aa13.49□□□□□ -0.25
PDZRN3-205ENST00000466780 TOP3BO95985 862 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms