RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 COL6A3P12111 3177 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 PAPSS1O43252 624 aaPredicted RBP16.8■□□□□ 0.28
GPC1-207ENST00000466624 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
GPC1-207ENST00000466624 CEBPBP17676 345 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
GPC1-207ENST00000466624 TEAD2Q15562 447 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 ASTE1Q2TB18 679 aaPredicted RBP16.8■□□□□ 0.28
GPC1-207ENST00000466624 ACAD10Q6JQN1 1059 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 BEND5Q7L4P6 421 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 GET4Q7L5D6 327 aaPredicted RBP16.8■□□□□ 0.28
GPC1-207ENST00000466624 OTOP3Q7RTS5 596 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 NPAS3Q8IXF0 933 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 SPC24Q8NBT2 197 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 ANP32BQ92688 251 aaKnown RBP16.8■□□□□ 0.28
GPC1-207ENST00000466624 FGF13Q92913 245 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 C18orf8Q96DM3 657 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 VCPIP1Q96JH7 1222 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 TASP1Q9H6P5 420 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 SYNCQ9H7C4 482 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 ASNSD1Q9NWL6 643 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 ADAMTS1Q9UHI8 967 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 CDH7Q9ULB5 785 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 STRIP2Q9ULQ0 834 aa16.8■□□□□ 0.28
GPC1-207ENST00000466624 NRG2O14511 850 aaPredicted RBP16.79■□□□□ 0.28
GPC1-207ENST00000466624 RTN2O75298 545 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 OLFM2O95897 454 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 OAS1P00973 400 aaKnown RBP16.79■□□□□ 0.28
GPC1-207ENST00000466624 ERBB2P04626 1255 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 CALB1P05937 261 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 GLI1P08151 1106 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 IL9P15248 144 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 EIF4A3P38919 411 aaKnown RBP16.79■□□□□ 0.28
GPC1-207ENST00000466624 YWHAGP61981 247 aaKnown RBP eCLIP16.79■□□□□ 0.28
GPC1-207ENST00000466624 CYP4F8P98187 520 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 PTP4A2Q12974 167 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 ZNF268Q14587 947 aaPredicted RBP16.79■□□□□ 0.28
GPC1-207ENST00000466624 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 TOGARAM2Q6ZUX3 1019 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 MON1BQ7L1V2 547 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 SCD5Q86SK9 330 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 ACSF2Q96CM8 615 aaPredicted RBP16.79■□□□□ 0.28
GPC1-207ENST00000466624 CDK5RAP1Q96SZ6 601 aaKnown RBP16.79■□□□□ 0.28
GPC1-207ENST00000466624 CHP1Q99653 195 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 ISCUQ9H1K1 167 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 WDR35Q9P2L0 1181 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 EPS15L1Q9UBC2 864 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 TJP2Q9UDY2 1190 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 PRKAG3Q9UGI9 489 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 CHORDC1Q9UHD1 332 aaPredicted RBP16.79■□□□□ 0.28
GPC1-207ENST00000466624 NENFQ9UMX5 172 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 NR2E1Q9Y466 385 aa16.79■□□□□ 0.28
GPC1-207ENST00000466624 A0A087X0T9 212 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 A0A1W2PQH9 124 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 YJEFN3A6XGL0 299 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 E7ENQ6 273 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 PIK3R2O00459 728 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 LTFP02788 710 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 FAM228BP0C875 321 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 RALAP11233 206 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 GJA1P17302 382 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 SLC6A3Q01959 620 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 SLC18A3Q16572 532 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 HECTD3Q5T447 861 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 GPR158Q5T848 1215 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 KLHDC10Q6PID8 442 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 OLFML1Q6UWY5 402 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 FAM183BPQ6ZVS7 135 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 SLC26A9Q7LBE3 791 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 TADA2BQ86TJ2 420 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 XYLT1Q86Y38 959 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 CLEC4CQ8WTT0 213 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 ING5Q8WYH8 240 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 GOLGA1Q92805 767 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 MCRS1Q96EZ8 462 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 ASB2Q96Q27 587 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 MYADMQ96S97 322 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 C11orf70Q9BRQ4 267 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.78■□□□□ 0.28
GPC1-207ENST00000466624 DEF6Q9H4E7 631 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 NHEJ1Q9H9Q4 299 aaPredicted RBP16.78■□□□□ 0.28
GPC1-207ENST00000466624 NMUR1Q9HB89 426 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 ABCC13Q9NSE7 274 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
GPC1-207ENST00000466624 ADAM22Q9P0K1 906 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
GPC1-207ENST00000466624 LAMP2P13473 410 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 GBP2P32456 591 aaPredicted RBP16.77■□□□□ 0.28
GPC1-207ENST00000466624 KCNQ1P51787 676 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 STXBP5Q5T5C0 1151 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 BSPRYQ5W0U4 402 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 BTBD8Q5XKL5 378 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 TXNDC8Q6A555 127 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 OR6B2Q6IFH4 312 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 ALKBH5Q6P6C2 394 aaKnown RBP16.77■□□□□ 0.28
GPC1-207ENST00000466624 ARCQ7LC44 396 aa16.77■□□□□ 0.28
GPC1-207ENST00000466624 TMTC1Q8IUR5 882 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms