RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 TFDP2Q14188 446 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 GRIK4Q16099 956 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 MTDHQ86UE4 582 aaKnown RBP17.03■□□□□ 0.32
SLX4-202ENST00000466154 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 SERAC1Q96JX3 654 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 ZMAT2Q96NC0 199 aaKnown RBP17.03■□□□□ 0.32
SLX4-202ENST00000466154 ACSS3Q9H6R3 686 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 CDHR5Q9HBB8 845 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 RGPD3A6NKT7 1758 aaPredicted RBP17.03■□□□□ 0.32
SLX4-202ENST00000466154 RGPD4Q7Z3J3 1758 aa17.03■□□□□ 0.32
SLX4-202ENST00000466154 PRPF4O43172 522 aaKnown RBP eCLIP17.02■□□□□ 0.32
SLX4-202ENST00000466154 EDF1O60869 148 aaKnown RBP17.02■□□□□ 0.32
SLX4-202ENST00000466154 CCDC142Q17RM4 750 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 TAF1BQ53T94 588 aaPredicted RBP17.02■□□□□ 0.32
SLX4-202ENST00000466154 PLD5Q8N7P1 536 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 LENG1Q96BZ8 264 aaPredicted RBP17.02■□□□□ 0.32
SLX4-202ENST00000466154 RNF157Q96PX1 679 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 PLCD4Q9BRC7 762 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 MROH8Q9H579 483 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 SENP1Q9P0U3 644 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 SEPT10Q9P0V9 454 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 USH1CQ9Y6N9 552 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 TYROBPO43914 113 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 KITP10721 976 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 NOMO1Q15155 1222 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 PRAMEF19Q5SWL8 479 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
SLX4-202ENST00000466154 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.02■□□□□ 0.32
SLX4-202ENST00000466154 RFWD2Q8NHY2 731 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 PTPRN2Q92932 1015 aa17.02■□□□□ 0.32
SLX4-202ENST00000466154 ZC3H7BQ9UGR2 993 aaKnown RBP17.02■□□□□ 0.32
SLX4-202ENST00000466154 H0Y3Z8 333 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 UGT1A9O60656 530 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 BGNP21810 368 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 CRADDP78560 199 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 GALNTL6Q49A17 601 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 TDRPQ86YL5 185 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 GRAMD1AQ96CP6 724 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 MECRQ9BV79 373 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 NXF3Q9H4D5 531 aaKnown RBP17.02■□□□□ 0.31
SLX4-202ENST00000466154 UGT1A7Q9HAW7 530 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 UGT1A10Q9HAW8 530 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 UGT1A8Q9HAW9 530 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 CYP3A43Q9HB55 503 aa17.02■□□□□ 0.31
SLX4-202ENST00000466154 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.31
SLX4-202ENST00000466154 A6NJR5 290 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 MAGEB2O15479 319 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 ATICP31939 592 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 SLC8A1P32418 973 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 GJA5P36382 358 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 ERFP50548 548 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 RABGGTBP53611 331 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 GBE1Q04446 702 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 ZNF618Q5T7W0 954 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 PCDH19Q8TAB3 1148 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 DCAKDQ8WVC6 231 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 ZFP69BQ9UJL9 534 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 MFHAS1Q9Y4C4 1052 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 CFAP69A5D8W1 941 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 TRIM49D1C9J1S8 452 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 PFKMP08237 780 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 TAPT1Q6NXT6 567 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 NLRP9Q7RTR0 991 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 KCNN1Q92952 543 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 MANSC1Q9H8J5 431 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 MARCOQ9UEW3 520 aaPredicted RBP17.01■□□□□ 0.31
SLX4-202ENST00000466154 ITGA11Q9UKX5 1188 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 STARD13Q9Y3M8 1113 aa17.01■□□□□ 0.31
SLX4-202ENST00000466154 CXorf49A8MYA2 514 aaPredicted RBP17■□□□□ 0.31
SLX4-202ENST00000466154 TROVE2P10155 538 aaKnown RBP eCLIP17■□□□□ 0.31
SLX4-202ENST00000466154 DESP17661 470 aa17■□□□□ 0.31
SLX4-202ENST00000466154 STIP1P31948 543 aaKnown RBP17■□□□□ 0.31
SLX4-202ENST00000466154 GRIA1P42261 906 aa17■□□□□ 0.31
SLX4-202ENST00000466154 RNF43Q68DV7 783 aa17■□□□□ 0.31
SLX4-202ENST00000466154 ADGRD1Q6QNK2 874 aa17■□□□□ 0.31
SLX4-202ENST00000466154 LCLAT1Q6UWP7 414 aa17■□□□□ 0.31
SLX4-202ENST00000466154 FAM131BQ86XD5 332 aa17■□□□□ 0.31
SLX4-202ENST00000466154 PYROXD2Q8N2H3 581 aa17■□□□□ 0.31
SLX4-202ENST00000466154 OR6J1Q8NGC5 347 aa17■□□□□ 0.31
SLX4-202ENST00000466154 CXorf38Q8TB03 319 aa17■□□□□ 0.31
SLX4-202ENST00000466154 PCDH18Q9HCL0 1135 aa17■□□□□ 0.31
SLX4-202ENST00000466154 BRCA2P51587 3418 aa17■□□□□ 0.31
SLX4-202ENST00000466154 IQANK1A0A1B0GTG1 560 aa17■□□□□ 0.31
SLX4-202ENST00000466154 E2F8A0AVK6 867 aa17■□□□□ 0.31
SLX4-202ENST00000466154 DYNC1LI2O43237 492 aaPredicted RBP17■□□□□ 0.31
SLX4-202ENST00000466154 PAPSS1O43252 624 aaPredicted RBP17■□□□□ 0.31
SLX4-202ENST00000466154 UNC5CO95185 931 aa17■□□□□ 0.31
SLX4-202ENST00000466154 ZWINTO95229 277 aa17■□□□□ 0.31
SLX4-202ENST00000466154 LMO2P25791 158 aa17■□□□□ 0.31
SLX4-202ENST00000466154 PPIL2Q13356 520 aa17■□□□□ 0.31
SLX4-202ENST00000466154 SWT1Q5T5J6 900 aaKnown RBP17■□□□□ 0.31
SLX4-202ENST00000466154 MROH9Q5TGP6 573 aa17■□□□□ 0.31
SLX4-202ENST00000466154 CCDC125Q86Z20 511 aa17■□□□□ 0.31
SLX4-202ENST00000466154 N4BP2L2Q92802 583 aaPredicted RBP17■□□□□ 0.31
SLX4-202ENST00000466154 TMPRSS4Q9NRS4 437 aa17■□□□□ 0.31
SLX4-202ENST00000466154 CACNG4Q9UBN1 327 aa17■□□□□ 0.31
SLX4-202ENST00000466154 CDC25CP30307 473 aa17■□□□□ 0.31
SLX4-202ENST00000466154 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms