RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 MTF2Q9Y483 593 aaPredicted RBP27.28■■□□□ 1.96
SMC4-206ENST00000465903 M0QYV0 167 aa27.27■■□□□ 1.96
SMC4-206ENST00000465903 TKTL1P51854 596 aa27.27■■□□□ 1.96
SMC4-206ENST00000465903 MLLT6P55198 1093 aaPredicted RBP27.27■■□□□ 1.96
SMC4-206ENST00000465903 SMYD5Q6GMV2 418 aa27.27■■□□□ 1.96
SMC4-206ENST00000465903 PM20D1Q6GTS8 502 aa27.27■■□□□ 1.96
SMC4-206ENST00000465903 TTC8Q8TAM2 541 aa27.27■■□□□ 1.96
SMC4-206ENST00000465903 LSM14BQ9BX40 385 aaKnown RBP27.27■■□□□ 1.96
SMC4-206ENST00000465903 FHOD1Q9Y613 1164 aa27.27■■□□□ 1.96
SMC4-206ENST00000465903 PIAS3Q9Y6X2 628 aa27.27■■□□□ 1.96
SMC4-206ENST00000465903 FOXN3O00409 490 aaPredicted RBP27.26■■□□□ 1.95
SMC4-206ENST00000465903 TLR5O60602 858 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 TBX18O95935 607 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 GLULP15104 373 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 ARSAP15289 507 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 SOX9P48436 509 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 PMF1Q6P1K2 205 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 CC2D1AQ6P1N0 951 aaPredicted RBP27.26■■□□□ 1.95
SMC4-206ENST00000465903 BHLHA9Q7RTU4 235 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 TTC16Q8NEE8 873 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 OSCP1Q8WVF1 389 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 NDRG1Q92597 394 aaKnown RBP27.26■■□□□ 1.95
SMC4-206ENST00000465903 NAA15Q9BXJ9 866 aaKnown RBP27.26■■□□□ 1.95
SMC4-206ENST00000465903 ULBP1Q9BZM6 244 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 LINC00597Q9H2U6 94 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 EBF3Q9H4W6 596 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 LTB4R2Q9NPC1 389 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.26■■□□□ 1.95
SMC4-206ENST00000465903 WNT6Q9Y6F9 365 aa27.26■■□□□ 1.95
SMC4-206ENST00000465903 OTOL1A6NHN0 477 aaPredicted RBP27.25■■□□□ 1.95
SMC4-206ENST00000465903 PNMA6AP0CW24 399 aaPredicted RBP27.25■■□□□ 1.95
SMC4-206ENST00000465903 RARGP13631 454 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 ATP1A3P13637 1013 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 CDK11BP21127 795 aaKnown RBP27.25■■□□□ 1.95
SMC4-206ENST00000465903 GNA15P30679 374 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 CLCN1P35523 988 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 USP8P40818 1118 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 GPD2P43304 727 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 PSEN1P49768 467 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 KLK7P49862 253 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 RUNX3Q13761 415 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 ZNF687Q8N1G0 1237 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 ZNF276Q8N554 614 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 PJA1Q8NG27 643 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 WBP2Q969T9 261 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 LRRC4Q9HBW1 653 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 NAGPAQ9UK23 515 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 NUDT5Q9UKK9 219 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 SIT1Q9Y3P8 196 aa27.25■■□□□ 1.95
SMC4-206ENST00000465903 UCHL3P15374 230 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 TARSP26639 723 aaKnown RBP27.24■■□□□ 1.95
SMC4-206ENST00000465903 RGS7P49802 495 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 ZNF165P49910 485 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 ADIGQ0VDE8 80 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 FZD5Q13467 585 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 IQCB1Q15051 598 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 PDGFRLQ15198 375 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 SKOR2Q2VWA4 1001 aaPredicted RBP27.24■■□□□ 1.95
SMC4-206ENST00000465903 EML3Q32P44 896 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 ITPRIPL2Q3MIP1 535 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 DENND1BQ6P3S1 775 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 ZNF852Q6ZMS4 543 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 CCDC105Q8IYK2 499 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 C8orf33Q9H7E9 229 aaPredicted RBP27.24■■□□□ 1.95
SMC4-206ENST00000465903 PLCB1Q9NQ66 1216 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 DUS2Q9NX74 493 aaKnown RBP27.24■■□□□ 1.95
SMC4-206ENST00000465903 CLIC5Q9NZA1 410 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 DLGAP2Q9P1A6 1054 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 SIK3Q9Y2K2 1263 aa27.24■■□□□ 1.95
SMC4-206ENST00000465903 CACNA1IQ9P0X4 2223 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 FAM170BA6NMN3 283 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 LGALS16A8MUM7 142 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 MAN2B1O00754 1011 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 THAP12O43422 761 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 ZBED1O96006 694 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 DCNP07585 359 aaKnown RBP27.23■■□□□ 1.95
SMC4-206ENST00000465903 TPM2P07951 284 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 RFX1P22670 979 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 KPNA1P52294 538 aaPredicted RBP27.23■■□□□ 1.95
SMC4-206ENST00000465903 DRAP1Q14919 205 aaPredicted RBP27.23■■□□□ 1.95
SMC4-206ENST00000465903 TXNDC11Q6PKC3 985 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 FAM71AQ8IYT1 594 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 SCML4Q8N228 414 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 KIAA1958Q8N8K9 716 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 ANKRD20A12PQ8NF67 263 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 FAM3CQ92520 227 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 CHFRQ96EP1 664 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 HSFY1Q96LI6 401 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 KLF16Q9BXK1 252 aaPredicted RBP27.23■■□□□ 1.95
SMC4-206ENST00000465903 OSBPL6Q9BZF3 934 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 GANQ9H2C0 597 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 CFAP97Q9P2B7 532 aa27.23■■□□□ 1.95
SMC4-206ENST00000465903 SMTNL1A8MU46 457 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 SPECC1L-ADORA2AF8WAN1 911 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 MDM4O15151 490 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 LCP1P13796 627 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 CTHP32929 405 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 ATP5C1P36542 298 aaKnown RBP27.22■■□□□ 1.95
SMC4-206ENST00000465903 IFNAR2P48551 515 aa27.22■■□□□ 1.95
SMC4-206ENST00000465903 RPL34P49207 117 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms