RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	SMO	Q99835	787 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	TMUB1	Q9BVT8	246 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	UBXN6	Q9BZV1	441 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	ZCWPW1	Q9H0M4	648 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	PDCL3	Q9H2J4	239 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	CHST7	Q9NS84	486 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	PARVA	Q9NVD7	372 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	CTTNBP2NL	Q9P2B4	639 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	WDR35	Q9P2L0	1181 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	CDC23	Q9UJX2	597 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	TMEM59L	Q9UK28	342 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	FAN1	Q9Y2M0	1017 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	ALG6	Q9Y672	507 aa		9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	MRPL42	Q9Y6G3	142 aa	Known RBP	9.28	□□□□□ -0.92
UBA3-208	ENST00000465627	GREB1	Q4ZG55	1949 aa		9.27	□□□□□ -0.92
UBA3-208	ENST00000465627	TMEM221	A6NGB7	291 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	NT5C1B-RDH14	C9J2C7	533 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627		M0R296	226 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	CES2	O00748	559 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	TRAPPC3	O43617	180 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	TADA2A	O75478	443 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	PROSC	O94903	275 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	UPP2	O95045	317 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	GJB5	O95377	273 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	FGB	P02675	491 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	NPR3	P17342	541 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	ADORA2B	P29275	332 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	MAN1A1	P33908	653 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	RFC1	P35251	1148 aa	Predicted RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	IRS1	P35568	1242 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	NOP2	P46087	812 aa	Known RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	PEX5	P50542	639 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	YWHAH	Q04917	246 aa	Predicted RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	ZP2	Q05996	745 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	ADCY1	Q08828	1119 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	TUBB2A	Q13885	445 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	RTP2	Q5QGT7	225 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	LIN9	Q5TKA1	542 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	DCAF12L1	Q5VU92	463 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	FAM183BP	Q6ZVS7	135 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	OTOP2	Q7RTS6	562 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	BHLHA9	Q7RTU4	235 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	PHLDB2	Q86SQ0	1253 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	PIGZ	Q86VD9	579 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	METTL23	Q86XA0	190 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	CREG2	Q8IUH2	290 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	SUGP1	Q8IWZ8	645 aa	Known RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	SYCE1	Q8N0S2	351 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	ARFGAP1	Q8N6T3	406 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	JOSD2	Q8TAC2	188 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	COG1	Q8WTW3	980 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	ZNF592	Q92610	1267 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	ALG3	Q92685	438 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	CLP1	Q92989	425 aa	Known RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	MYLPF	Q96A32	169 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	IGSF21	Q96ID5	467 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	FAM193B	Q96PV7	902 aa	Predicted RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	C11orf84	Q9BUA3	381 aa	Predicted RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	TUBB2B	Q9BVA1	445 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	MRPL47	Q9HD33	250 aa	Known RBP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	ANAPC7	Q9UJX3	599 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	STRIP2	Q9ULQ0	834 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	SCIN	Q9Y6U3	715 aa		9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	SF3B1	O75533	1304 aa	Known RBP eCLIP	9.27	□□□□□ -0.93
UBA3-208	ENST00000465627	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	C2CD4B	A6NLJ0	364 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	PDE2A	O00408	941 aa	Predicted RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	URI1	O94763	535 aa	Predicted RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	ARHGEF15	O94989	841 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	COMT	P21964	271 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	CTNNA2	P26232	953 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	CTNNA1	P35221	906 aa	Known RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	NBL1	P41271	181 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	TAP1	Q03518	808 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	ELAVL2	Q12926	359 aa	Known RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	CFAP221	Q4G0U5	840 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	DNTTIP2	Q5QJE6	756 aa	Known RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	FAM171A1	Q5VUB5	890 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	PSRC1	Q6PGN9	363 aa	Predicted RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	KCNT2	Q6UVM3	1135 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	SLC26A9	Q7LBE3	791 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	GPRIN1	Q7Z2K8	1008 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	BNIPL	Q7Z465	357 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	SPRED2	Q7Z698	418 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	DAAM2	Q86T65	1068 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	LURAP1L	Q8IV03	231 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	SCML4	Q8N228	414 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	COLGALT1	Q8NBJ5	622 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	LRRN4CL	Q8ND94	238 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	KRT35	Q92764	455 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	B3GALT6	Q96L58	329 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	OSBPL9	Q96SU4	736 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	RHOBTB2	Q9BYZ6	727 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	DNAI2	Q9GZS0	605 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	KRT82	Q9NSB4	513 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	HESX1	Q9UBX0	185 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	PACSIN2	Q9UNF0	486 aa	Predicted RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	HYOU1	Q9Y4L1	999 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	SAR1B	Q9Y6B6	198 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	PLXNA4	Q9HCM2	1894 aa		9.26	□□□□□ -0.93

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