RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 POPDC2Q9HBU9 364 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 PAK6Q9NQU5 681 aaPredicted RBP4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 DONSONQ9NYP3 566 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 TJP2Q9UDY2 1190 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 RAB21Q9UL25 225 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 OGDHLQ9ULD0 1010 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 MAGED2Q9UNF1 606 aaPredicted RBP4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 AP4E1Q9UPM8 1137 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 ATP8A1Q9Y2Q0 1164 aa4.3□□□□□ -1.72
ATP13A3-206ENST00000461660 ABHD14A-ACY1A0A1B0GW23 586 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SMIM23A6NLE4 172 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 C2CD4BA6NLJ0 364 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 NT5C1B-RDH14C9J2C7 533 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TULP2O00295 520 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 FSCN2O14926 492 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 IGHA2P01877 340 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 USP17L7P0C7H9 530 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 RFC2P35250 354 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SCNN1AP37088 669 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 MATKP42679 507 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ARSEP51690 589 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 AFF1P51825 1210 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 C1QTNF8P60827 252 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 BASP1P80723 227 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 MRPS5P82675 430 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 GPS1Q13098 491 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SLMAPQ14BN4 828 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 KRT71Q3SY84 523 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ATP13A4Q4VNC1 1196 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PPP1R21Q6ZMI0 780 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ARHGEF18Q6ZSZ5 1173 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ZC3H18Q86VM9 953 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 CCDC117Q8IWD4 279 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 WDTC1Q8N5D0 677 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 NIPA2Q8N8Q9 360 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PRELID2Q8N945 189 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ACTL9Q8TC94 416 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 MICAL1Q8TDZ2 1067 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 HDAC7Q8WUI4 952 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 NSMCE1Q8WV22 266 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC35F5Q8WV83 523 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 EDEM1Q92611 657 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SNF8Q96H20 258 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF512Q96ME7 567 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TOX2Q96NM4 488 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TTPALQ9BTX7 342 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SIK2Q9H0K1 926 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 MED4Q9NPJ6 270 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SEPT10Q9P0V9 454 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PCDHB12Q9Y5F1 795 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 IKBKGQ9Y6K9 419 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ARID2Q68CP9 1835 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 CFAP69A5D8W1 941 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 EEF2KO00418 725 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 NRP1O14786 923 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TRIM66O15016 1216 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TRUB2O95900 331 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 OR4Q2P0C623 313 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TKTP29401 623 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 GBP2P32456 591 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SERPINB6P35237 376 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PTPN9P43378 593 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PLA2G4AP47712 749 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ALDH1A3P47895 512 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PEX5P50542 639 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SARNPP82979 210 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 CAP1Q01518 475 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 OTUD4Q01804 1114 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 NNTQ13423 1086 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PLEKHG4Q58EX7 1191 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ERMARDQ5T6L9 678 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 IZUMO3Q5VZ72 239 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 VSTM1Q6UX27 236 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 LRRC31Q6UY01 552 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF572Q7Z3I7 529 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TADA2BQ86TJ2 420 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 DDX42Q86XP3 938 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF280BQ86YH2 543 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ANKLE1Q8NAG6 615 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC43A3Q8NBI5 491 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 CASKIN2Q8WXE0 1202 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 RAPGEF5Q92565 580 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 GCNAQ96QF7 691 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PAAF1Q9BRP4 392 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SNRNP25Q9BV90 132 aaKnown RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 DCLK3Q9C098 648 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 WDCPQ9H6R7 721 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 CRTAC1Q9NQ79 661 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 TTLL3Q9Y4R7 772 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ZSCAN5CA6NGD5 496 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 PPP1R12AO14974 1030 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 MEFVO15553 781 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 NBNO60934 754 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 ZNF189O75820 626 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 RTN3O95197 1032 aaPredicted RBP4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 SLC2A3P11169 496 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 LAG3P18627 525 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 KDELR1P24390 212 aa4.29□□□□□ -1.72
ATP13A3-206ENST00000461660 DNAJB2P25686 324 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms