RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 BCAR1P56945 870 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 DHX9Q08211 1270 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 IFFO1Q0D2I5 559 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 PTK6Q13882 451 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 BYSLQ13895 437 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 TFDP2Q14188 446 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 CCDC14Q49A88 953 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 DCAF6Q58WW2 860 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 PPP6R3Q5H9R7 873 aaPredicted RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 INTS6LQ5JSJ4 861 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 SH3PXD2AQ5TCZ1 1133 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 IZUMO3Q5VZ72 239 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 DUPD1Q68J44 220 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 C1orf228Q6PIY5 440 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 SLC26A9Q7LBE3 791 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 LIMS2Q7Z4I7 341 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 DEFB128Q7Z7B8 93 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 ZNF598Q86UK7 904 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 CEP57Q86XR8 500 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 SPATA2LQ8IUW3 424 aaPredicted RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 FAM126BQ8IXS8 530 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 ZDHHC14Q8IZN3 488 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 FUKQ8N0W3 1084 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 DEFB106AQ8N104 65 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 EIF1ADQ8N9N8 165 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 TSEN2Q8NCE0 465 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 BBOF1Q8ND07 529 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 MYCBPAPQ8TBZ2 947 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 RSAD2Q8WXG1 361 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 RSPH1Q8WYR4 309 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 NDRG1Q92597 394 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 APBB2Q92870 758 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 PCED1BQ96HM7 432 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 PIWIL1Q96J94 861 aaKnown RBP7.1□□□□□ -1.27
MSH2-204ENST00000461394 HERPUD2Q9BSE4 406 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 NEUROG2Q9H2A3 272 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 MED4Q9NPJ6 270 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 CRTAC1Q9NQ79 661 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 TMEM161AQ9NX61 479 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 ANAPC5Q9UJX4 755 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 STAP1Q9ULZ2 295 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 PLAAQ9Y263 795 aa7.1□□□□□ -1.27
MSH2-204ENST00000461394 TBKBP1A7MCY6 615 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 GOLGA8KD6RF30 607 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 H3BQF6 201 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 GABRDO14764 452 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 NDC80O14777 642 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 APOL1O14791 398 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 HOXA2O43364 376 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 LIASO43766 372 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 BEST1O76090 585 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 DDHD2O94830 711 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 IFNB1P01574 187 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 CD48P09326 243 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 BDNFP23560 247 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 SCNN1AP37088 669 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 HSPA9P38646 679 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 GRIK1P39086 918 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 PTPN9P43378 593 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 PMS2P54278 862 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 CCL23P55773 120 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 ARPP19P56211 112 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 EIF3EP60228 445 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 MRPS5P82675 430 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 OTUD4Q01804 1114 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 CAV1Q03135 178 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 YWHAHQ04917 246 aaPredicted RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 DEUP1Q05D60 604 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 MMRN1Q13201 1228 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 NME3Q13232 169 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 KLF1Q13351 362 aaPredicted RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 MBTPS1Q14703 1052 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 PDK2Q15119 407 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 MAPRE1Q15691 268 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 RAB6CQ53S08 254 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 BOLA3Q53S33 107 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 CLLU1OSQ5K130 101 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 ERMARDQ5T6L9 678 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 KIAA0319Q5VV43 1072 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 TRNP1Q6NT89 227 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 DARS2Q6PI48 645 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 TRAF7Q6Q0C0 670 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 C4orf50Q6ZRC1 276 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 CLEC20AQ6ZU45 233 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 ANKS1BQ7Z6G8 1248 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 ZNF280BQ86YH2 543 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 SCN4BQ8IWT1 228 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 DCP1BQ8IZD4 617 aaKnown RBP7.09□□□□□ -1.27
MSH2-204ENST00000461394 ARFGAP1Q8N6T3 406 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 CCDC89Q8N998 374 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 DBF4BQ8NFT6 615 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 SLC7A14Q8TBB6 771 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 SPATA18Q8TC71 538 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 CCHCR1Q8TD31 782 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 LINC01599Q8WXQ3 324 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 KCTD13Q8WZ19 329 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 P3H4Q92791 437 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 RNF34Q969K3 372 aa7.09□□□□□ -1.27
MSH2-204ENST00000461394 SCLYQ96I15 445 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms