RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TLR8Q9NR97 1041 aaKnown RBP16.23■□□□□ 0.19
VARS-219ENST00000461328 CFAP97Q9P2B7 532 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 HESX1Q9UBX0 185 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 FANCMQ8IYD8 2048 aa16.23■□□□□ 0.19
VARS-219ENST00000461328 FAM92AA1XBS5 289 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 SLC9A3R1O14745 358 aaPredicted RBP16.22■□□□□ 0.19
VARS-219ENST00000461328 SCAMP3O14828 347 aaKnown RBP16.22■□□□□ 0.19
VARS-219ENST00000461328 MBD3O95983 291 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 EGFP01133 1207 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 DRD1P21728 446 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 ERCC5P28715 1186 aaPredicted RBP16.22■□□□□ 0.19
VARS-219ENST00000461328 TUBP50607 506 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 GALK1P51570 392 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 SNX30Q5VWJ9 437 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 ARHGAP17Q68EM7 881 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 KIAA1958Q8N8K9 716 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 EHBP1Q8NDI1 1231 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 CD101Q93033 1021 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 THAP9Q9H5L6 903 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 CCSER2Q9H7U1 834 aa16.22■□□□□ 0.19
VARS-219ENST00000461328 HHLA1C9JL84 531 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 PES1O00541 588 aaKnown RBP16.21■□□□□ 0.19
VARS-219ENST00000461328 LILRB5O75023 590 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 ATG13O75143 517 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 VDRP11473 427 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 KRT5P13647 590 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 BCAT1P54687 386 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 GCNT1Q02742 428 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 HSP90AA4PQ58FG1 418 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 NAIF1Q69YI7 327 aaPredicted RBP16.21■□□□□ 0.19
VARS-219ENST00000461328 ARHGEF19Q8IW93 802 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 RUBCNQ92622 972 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 KAT5Q92993 513 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 MED15Q96RN5 788 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 FBRSL1Q9HCM7 1045 aaKnown RBP16.21■□□□□ 0.19
VARS-219ENST00000461328 TSPAN16Q9UKR8 245 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 SCML2Q9UQR0 700 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 SH3BP1Q9Y3L3 701 aa16.21■□□□□ 0.19
VARS-219ENST00000461328 MYH10P35580 1976 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 TLR5O60602 858 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 RNF40O75150 1001 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 PAPSS2O95340 614 aaPredicted RBP16.2■□□□□ 0.18
VARS-219ENST00000461328 PAEPP09466 180 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 ZDHHC11BP0C7U3 371 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
VARS-219ENST00000461328 FBXO43Q4G163 708 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
VARS-219ENST00000461328 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 GBP6Q6ZN66 633 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 UBR7Q8N806 425 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 ANKRD52Q8NB46 1076 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 SUMF1Q8NBK3 374 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 RBBP8NLQ8NC74 664 aaPredicted RBP16.2■□□□□ 0.18
VARS-219ENST00000461328 LMO3Q8TAP4 145 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 EPC1Q9H2F5 836 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 C2orf42Q9NWW7 574 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 TBC1D14Q9P2M4 693 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 NCDNQ9UBB6 729 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 NAGPAQ9UK23 515 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 SMG5Q9UPR3 1016 aaKnown RBP16.2■□□□□ 0.18
VARS-219ENST00000461328 MYO16Q9Y6X6 1858 aa16.2■□□□□ 0.18
VARS-219ENST00000461328 A0A1W2PQH9 124 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 E2F8A0AVK6 867 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 K7ESF4 209 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 CYP17A1P05093 508 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 IRF1P10914 325 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 FNTBP49356 437 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 KIF11P52732 1056 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 GOLGA8FQ08AF8 430 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 GOLGA8DPQ0D2H9 430 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 BST2Q10589 180 aaKnown RBP16.19■□□□□ 0.18
VARS-219ENST00000461328 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 PKN3Q6P5Z2 889 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 PIGZQ86VD9 579 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 TTC30AQ86WT1 665 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 IRF2BP1Q8IU81 584 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 ZFRQ96KR1 1074 aaKnown RBP16.19■□□□□ 0.18
VARS-219ENST00000461328 LRRC4Q9HBW1 653 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 UBE2TQ9NPD8 197 aaPredicted RBP16.19■□□□□ 0.18
VARS-219ENST00000461328 RAB23Q9ULC3 237 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 KIAA1257Q9ULG3 409 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 MYO15AQ9UKN7 3530 aa16.19■□□□□ 0.18
VARS-219ENST00000461328 RIF1Q5UIP0 2472 aaKnown RBP16.18■□□□□ 0.18
VARS-219ENST00000461328 FAM186AA6NE01 2351 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 M0QYV0 167 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 O00370 1275 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 XPO1O14980 1071 aaKnown RBP16.18■□□□□ 0.18
VARS-219ENST00000461328 ADH1CP00326 375 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 SETSIPP0DME0 302 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 RALAP11233 206 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 BRD2P25440 801 aaKnown RBP16.18■□□□□ 0.18
VARS-219ENST00000461328 PGFP49763 221 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 PDE4CQ08493 712 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 DMWDQ09019 674 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 DHCR24Q15392 516 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 EXOC3L4Q17RC7 722 aa16.18■□□□□ 0.18
VARS-219ENST00000461328 CT47A1Q5JQC4 288 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms