RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 DNALI1O14645 258 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-203ENST00000460265 KDELR1P24390 212 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 CNGA2Q16280 664 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 TTC13Q8NBP0 860 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 PPP1R14CQ8TAE6 165 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 NDNQ99608 321 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 LBHD1Q9BQE6 289 aaPredicted RBP16.04■□□□□ 0.16
LMNB1-203ENST00000460265 SDCBP2Q9H190 292 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 VCX3BQ9H321 246 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 FZD8Q9H461 694 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 VCX3AQ9NNX9 186 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 GALNT8Q9NY28 637 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 MRPL42Q9Y6G3 142 aaKnown RBP16.04■□□□□ 0.16
LMNB1-203ENST00000460265 hCG_2014768A0A024R1R8 64 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 CCNG1P51959 295 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 NME3Q13232 169 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 DGKDQ16760 1214 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 ZNF449Q6P9G9 518 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 UNC45BQ8IWX7 931 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 FBXO36Q8NEA4 188 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 TTC17Q96AE7 1141 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 GOLGA2P5Q9HBQ8 144 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 SIX4Q9UIU6 781 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 ADGRA2Q96PE1 1338 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
LMNB1-203ENST00000460265 IGKV6D-21A0A0A0MT36 114 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 SIGLEC16A6NMB1 481 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 HCRTO43612 131 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 ATP6V1G1O75348 118 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 MT-ND3P03897 115 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 KRT4P19013 534 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 MMP13P45452 471 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 GDF10P55107 478 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 BEX3Q00994 111 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 RAB6CQ53S08 254 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 RBM12BQ8IXT5 1001 aaKnown RBP16.03■□□□□ 0.16
LMNB1-203ENST00000460265 FITM2Q8N6M3 262 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 SLC4A11Q8NBS3 891 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 BEST2Q8NFU1 509 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 FAM172AQ8WUF8 416 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 UCMAQ8WVF2 138 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 RNF34Q969K3 372 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 RAB6CQ9H0N0 254 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 ARL2BPQ9Y2Y0 163 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 USH1CQ9Y6N9 552 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 B4GALT4O60513 344 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 VDRP11473 427 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
LMNB1-203ENST00000460265 CENPFP49454 3210 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 SYT17Q9BSW7 474 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 C12orf65Q9H3J6 166 aaKnown RBP16.03■□□□□ 0.16
LMNB1-203ENST00000460265 CYTH4Q9UIA0 394 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 BARX2Q9UMQ3 279 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-203ENST00000460265 EDNRBP24530 442 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 SDCCAG8Q86SQ7 713 aaPredicted RBP16.03■□□□□ 0.16
LMNB1-203ENST00000460265 TRIM42Q8IWZ5 723 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 CEP41Q9BYV8 373 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 SLC13A1Q9BZW2 595 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.03■□□□□ 0.163e-8■□□□□ 8.3
LMNB1-203ENST00000460265 RHBDL2Q9NX52 303 aa16.03■□□□□ 0.16
LMNB1-203ENST00000460265 AVILO75366 819 aa16.02■□□□□ 0.16
LMNB1-203ENST00000460265 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.16
LMNB1-203ENST00000460265 C22orf31O95567 290 aa16.02■□□□□ 0.16
LMNB1-203ENST00000460265 GSTT1P30711 240 aa16.02■□□□□ 0.16
LMNB1-203ENST00000460265 PTDSS1P48651 473 aaKnown RBP16.02■□□□□ 0.16
LMNB1-203ENST00000460265 TFDP2Q14188 446 aa16.02■□□□□ 0.16
LMNB1-203ENST00000460265 PPP1R26Q5T8A7 1209 aaPredicted RBP16.02■□□□□ 0.16
LMNB1-203ENST00000460265 XYLT2Q9H1B5 865 aa16.02■□□□□ 0.16
LMNB1-203ENST00000460265 BLOC1S6Q9UL45 172 aa16.02■□□□□ 0.16
LMNB1-203ENST00000460265 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 BTBD19C9JJ37 291 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 PPEF2O14830 753 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 MCF2P10911 925 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 CDKN2BP42772 138 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 C12orf50Q8NA57 414 aaPredicted RBP16.02■□□□□ 0.15
LMNB1-203ENST00000460265 NDRG1Q92597 394 aaKnown RBP16.02■□□□□ 0.15
LMNB1-203ENST00000460265 AP5M1Q9H0R1 490 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 IFT122Q9HBG6 1241 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 LRRC4Q9HBW1 653 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 PREBQ9HCU5 417 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 ZNF232Q9UNY5 417 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.15
LMNB1-203ENST00000460265 MYO18AQ92614 2054 aaKnown RBP16.02■□□□□ 0.15
LMNB1-203ENST00000460265 CETPP11597 493 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 CCDC130P13994 396 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 CLDN10P78369 228 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 MTA1Q13330 715 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 SPARCL1Q14515 664 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 PAN2Q504Q3 1202 aaKnown RBP16.02■□□□□ 0.15
LMNB1-203ENST00000460265 ANKRD22Q5VYY1 191 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 FAM183BPQ6ZVS7 135 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 CCDC125Q86Z20 511 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 PIWIL1Q96J94 861 aaKnown RBP16.02■□□□□ 0.15
LMNB1-203ENST00000460265 MRPL45Q9BRJ2 306 aaKnown RBP16.02■□□□□ 0.15
LMNB1-203ENST00000460265 RXFP1Q9HBX9 757 aa16.02■□□□□ 0.15
LMNB1-203ENST00000460265 NVLO15381 856 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms