RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MYOFQ9NZM1 2061 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 SLC30A4O14863 429 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 ADORA2BP29275 332 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 GTF2H1P32780 548 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 SEC13P55735 322 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 MRPS21P82921 87 aaKnown RBP24.08■■□□□ 1.45
PTPN4-207ENST00000460162 ADAM9Q13443 819 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 CLEC20AQ6ZU45 233 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 TWNKQ96RR1 684 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 PNKPQ96T60 521 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 DNAI2Q9GZS0 605 aa24.08■■□□□ 1.45
PTPN4-207ENST00000460162 APOBEC3GQ9HC16 384 aaKnown RBP24.08■■□□□ 1.45
PTPN4-207ENST00000460162 TLR8Q9NR97 1041 aaKnown RBP24.08■■□□□ 1.45
PTPN4-207ENST00000460162 TLR5O60602 858 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 CILPO75339 1184 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 APODP05090 189 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 MCCD1P59942 119 aaPredicted RBP24.07■■□□□ 1.44
PTPN4-207ENST00000460162 PLK5Q496M5 336 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 HSF5Q4G112 596 aaPredicted RBP24.07■■□□□ 1.44
PTPN4-207ENST00000460162 C2orf27AQ580R0 203 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 C12orf40Q86WS4 652 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 FAXDC2Q96IV6 333 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 ARRDC1-AS1Q9H2J1 176 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 MMRN2Q9H8L6 949 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 GDPD2Q9HCC8 539 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 CYLDQ9NQC7 956 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 PCDHA5Q9Y5H7 936 aa24.07■■□□□ 1.44
PTPN4-207ENST00000460162 HOXC11O43248 304 aaPredicted RBP24.06■■□□□ 1.44
PTPN4-207ENST00000460162 KAT7O95251 611 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 GAD2Q05329 585 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 ELF2Q15723 593 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 LY6G5CQ5SRR4 150 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 KRT39Q6A163 491 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 C11orf74Q86VG3 221 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 RASSF3Q86WH2 238 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 CYFIP2Q96F07 1278 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 CNOT6LQ96LI5 555 aaKnown RBP24.06■■□□□ 1.44
PTPN4-207ENST00000460162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.06■■□□□ 1.44
PTPN4-207ENST00000460162 ARHGEF4Q9NR80 690 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 RMND1Q9NWS8 449 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 SCML2Q9UQR0 700 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 SDK1Q7Z5N4 2213 aa24.06■■□□□ 1.44
PTPN4-207ENST00000460162 SPTBN2O15020 2390 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 HHLA1C9JL84 531 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 ZNF806P0C7X5 589 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 CD58P19256 250 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 GRIA2P42262 883 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 SLC6A11P48066 632 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 MXI1P50539 228 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 DGKEP52429 567 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 GPRIN1Q7Z2K8 1008 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 BBS7Q8IWZ6 715 aa24.05■■□□□ 1.44
PTPN4-207ENST00000460162 C12orf50Q8NA57 414 aaPredicted RBP24.05■■□□□ 1.44
PTPN4-207ENST00000460162 A0A0A0MRY4 1105 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 STX10O60499 249 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 EPB41P11171 864 aaKnown RBP24.04■■□□□ 1.44
PTPN4-207ENST00000460162 CHRM1P11229 460 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-207ENST00000460162 MPLP40238 635 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 LIMK1P53667 647 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 KDSRQ06136 332 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 CRY1Q16526 586 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 PREPLQ4J6C6 727 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-207ENST00000460162 AASDHQ4L235 1098 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-207ENST00000460162 PLA2G2CQ5R387 149 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 BTBD8Q5XKL5 378 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 ETFBKMTQ8IXQ9 262 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 SMYD4Q8IYR2 804 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-207ENST00000460162 TTC39CQ8N584 583 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 WHAMMQ8TF30 809 aa24.04■■□□□ 1.44
PTPN4-207ENST00000460162 DUSP15Q9H1R2 295 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-207ENST00000460162 FAM124BQ9H5Z6 455 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-207ENST00000460162 DCDC2BA2VCK2 349 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 CETN3O15182 167 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 CYP26A1O43174 497 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 GDF9O60383 454 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 RHOBTB1O94844 696 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 IRF1P10914 325 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 PGFP49763 221 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 GOLGA8FQ08AF8 430 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 GOLGA8DPQ0D2H9 430 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 MESP2Q0VG99 397 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 PNOCQ13519 176 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 COBLL1Q53SF7 1204 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 ANO7Q6IWH7 933 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 FMR1NBQ8N0W7 255 aaPredicted RBP24.03■■□□□ 1.44
PTPN4-207ENST00000460162 PHTF2Q8N3S3 785 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 CCDC33Q8N5R6 958 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 ALLCQ8N6M5 410 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 IL17RCQ8NAC3 791 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 FBXL13Q8NEE6 735 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 JAKMIP2Q96AA8 810 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 SPHK2Q9NRA0 654 aa24.03■■□□□ 1.44
PTPN4-207ENST00000460162 PLXND1Q9Y4D7 1925 aa24.02■■□□□ 1.44
PTPN4-207ENST00000460162 ALDH1A2O94788 518 aa24.02■■□□□ 1.44
PTPN4-207ENST00000460162 ACO1P21399 889 aaKnown RBP24.02■■□□□ 1.44
PTPN4-207ENST00000460162 ATP5C1P36542 298 aaKnown RBP24.02■■□□□ 1.44
PTPN4-207ENST00000460162 TNFRSF4P43489 277 aa24.02■■□□□ 1.44
PTPN4-207ENST00000460162 KIR2DL1P43626 348 aaPredicted RBP24.02■■□□□ 1.44
PTPN4-207ENST00000460162 SF3A2Q15428 464 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms