RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 MON1AQ86VX9 555 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 CELF5Q8N6W0 485 aaKnown RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 ZNF397Q8NF99 534 aaPredicted RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 MYCBPAPQ8TBZ2 947 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 FUBP3Q96I24 572 aaKnown RBP eCLIP16.49■□□□□ 0.23
SDF4-204ENST00000459994 ARID3AQ99856 593 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 FAM83CQ9BQN1 747 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 B3GNT5Q9BYG0 378 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 NUCKS1Q9H1E3 243 aaKnown RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 TRPC7Q9HCX4 862 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 CISHQ9NSE2 258 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 FBXO4Q9UKT5 387 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 MRPS17Q9Y2R5 130 aaKnown RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 LUC7L2Q9Y383 392 aaKnown RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 FRYLO94915 3013 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 RNF225M0QZC1 329 aaPredicted RBP16.48■□□□□ 0.23
SDF4-204ENST00000459994 NCAM2O15394 837 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 PTPN1P18031 435 aaKnown RBP16.48■□□□□ 0.23
SDF4-204ENST00000459994 CASP14P31944 242 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 AVPR1AP37288 418 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 GRIK1P39086 918 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 MAGEA9P43362 315 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 SATB1Q01826 763 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 DMWDQ09019 674 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 ORC1Q13415 861 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 RAPGEF1Q13905 1077 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 ARID5BQ14865 1188 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 ARHGAP44Q17R89 818 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 UNC93AQ86WB7 457 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 DCLK2Q8N568 766 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 ARL14EPQ8N8R7 260 aaPredicted RBP16.48■□□□□ 0.23
SDF4-204ENST00000459994 SUMF1Q8NBK3 374 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 MRPS31Q92665 395 aaKnown RBP16.48■□□□□ 0.23
SDF4-204ENST00000459994 NELL1Q92832 810 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 PDLIM2Q96JY6 352 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 SPAG5Q96R06 1193 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 EBF3Q9H4W6 596 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 TDP1Q9NUW8 608 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 HMGXB4Q9UGU5 601 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 DCHS1Q96JQ0 3298 aa16.48■□□□□ 0.23
SDF4-204ENST00000459994 PTPRZ1P23471 2315 aaPredicted RBP16.47■□□□□ 0.23
SDF4-204ENST00000459994 RALGAPA1Q6GYQ0 2036 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 GOLGA6L6A8MZA4 724 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 F8VP50 259 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 F8VZ95 297 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 FOXN3O00409 490 aaPredicted RBP16.47■□□□□ 0.23
SDF4-204ENST00000459994 CILPO75339 1184 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 LMNAP02545 664 aaKnown RBP16.47■□□□□ 0.23
SDF4-204ENST00000459994 STAT1P42224 750 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 ZNF528Q3MIS6 628 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 PKN3Q6P5Z2 889 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 PAQR9Q6ZVX9 377 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 CNGA4Q8IV77 575 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 FAM71AQ8IYT1 594 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 TTC16Q8NEE8 873 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 CPLX3Q8WVH0 158 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 SYN2Q92777 582 aaPredicted RBP16.47■□□□□ 0.23
SDF4-204ENST00000459994 OTOGLQ3ZCN5 2332 aa16.47■□□□□ 0.23
SDF4-204ENST00000459994 A8MXQ7 604 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 AKR1B15C9JRZ8 316 aaPredicted RBP16.46■□□□□ 0.23
SDF4-204ENST00000459994 MFAP3LO75121 409 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 DDX6P26196 483 aaKnown RBP eCLIP16.46■□□□□ 0.23
SDF4-204ENST00000459994 KRT9P35527 623 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 SOX5P35711 763 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 ZNF132P52740 706 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 MLLT6P55198 1093 aaPredicted RBP16.46■□□□□ 0.23
SDF4-204ENST00000459994 USP4Q13107 963 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 ZNF77Q15935 545 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 RALGPS2Q86X27 583 aaPredicted RBP16.46■□□□□ 0.23
SDF4-204ENST00000459994 SPC24Q8NBT2 197 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 ZBTB44Q8NCP5 570 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 B3GALNT2Q8NCR0 500 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 WHAMMQ8TF30 809 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 SPATA17Q96L03 361 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 C8orf33Q9H7E9 229 aaPredicted RBP16.46■□□□□ 0.23
SDF4-204ENST00000459994 FBRSL1Q9HCM7 1045 aaKnown RBP16.46■□□□□ 0.23
SDF4-204ENST00000459994 POLR3BQ9NW08 1133 aaPredicted RBP16.46■□□□□ 0.23
SDF4-204ENST00000459994 AIPL1Q9NZN9 384 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 UXTQ9UBK9 157 aaPredicted RBP16.46■□□□□ 0.23
SDF4-204ENST00000459994 PCDHB4Q9Y5E5 795 aa16.46■□□□□ 0.23
SDF4-204ENST00000459994 LRRC53A6NM62 1247 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 LILRB5O75023 590 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 CD58P19256 250 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 HNRNPH3P31942 346 aaKnown RBP16.45■□□□□ 0.22
SDF4-204ENST00000459994 GSDMDP57764 484 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 IFRD2Q12894 506 aaPredicted RBP16.45■□□□□ 0.22
SDF4-204ENST00000459994 RUNX3Q13761 415 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 CCINQ13939 588 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 ITPRIPL2Q3MIP1 535 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 FSTL4Q6MZW2 842 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 VSTM1Q6UX27 236 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 DENND5BQ6ZUT9 1274 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 OR8K1Q8NGG5 319 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 KCNK16Q96T55 309 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 DNAJC7Q99615 494 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms