RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 MPP5Q8N3R9 675 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 ENDOVQ8N8Q3 282 aaKnown RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 RXFP2Q8WXD0 754 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZBED3Q96IU2 234 aaPredicted RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 ANKRD36BP1Q96IX9 119 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 THTPAQ9BU02 230 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 C20orf27Q9GZN8 174 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 NRBP2Q9NSY0 501 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 IL1RAPL1Q9NZN1 696 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 CPSF3Q9UKF6 684 aaKnown RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 PSMG1O95456 288 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 UBTFL6P0CB48 400 aaPredicted RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 NEK3P51956 506 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 AQP5P55064 265 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 YWHAZP63104 245 aaKnown RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 UBAP2LQ14157 1087 aaKnown RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 HSDL1Q3SXM5 330 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 CDCA2Q69YH5 1023 aaPredicted RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 C16orf46Q6P387 395 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 TEX9Q8N6V9 391 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 NIPA2Q8N8Q9 360 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 LNPEPQ9UIQ6 1025 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 E7ESA3 106 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 SMIM24O75264 130 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 FARP2O94887 1054 aaPredicted RBP20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 TAP1Q03518 808 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 KLC1Q07866 573 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 CA9Q16790 459 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 CFAP61Q8NHU2 1237 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 PGLYRP2Q96PD5 576 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 EBF4Q9BQW3 602 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 TEX264Q9Y6I9 313 aa20.37■□□□□ 0.85
CNEP1R1-203ENST00000458059 I3L4J1 428 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 TRAFD1O14545 582 aaPredicted RBP20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 LRRC74BQ6ZQY2 392 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 NCAPG2Q86XI2 1143 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 SLC4A11Q8NBS3 891 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZNF333Q96JL9 665 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZNF518BQ9C0D4 1074 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 SIX4Q9UIU6 781 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 A6NHS1 94 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 SPDYE16A6NNV3 312 aaPredicted RBP20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 LYPLA1O75608 230 aaPredicted RBP20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 CSH1P0DML2 217 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 CSH2P0DML3 217 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 PTPN7P35236 360 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 VHLP40337 213 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 PTPN11Q06124 597 aaPredicted RBP20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 EFCAB3Q8N7B9 438 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 POU5F2Q8N7G0 328 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 C1orf127Q8N9H9 656 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 PHC3Q8NDX5 983 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 HIPK4Q8NE63 616 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 CEP41Q9BYV8 373 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 PCDHGC3Q9UN70 934 aa20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 MTO1Q9Y2Z2 717 aaKnown RBP20.36■□□□□ 0.85
CNEP1R1-203ENST00000458059 DNAH12Q6ZR08 3092 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZBED1O96006 694 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 PGK2P07205 417 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 ATXN1P54253 815 aaKnown RBP20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 HSF5Q4G112 596 aaPredicted RBP20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 ATF7IP2Q5U623 682 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZBTB8OSQ8IWT0 167 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 KBTBD2Q8IY47 623 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 NDUFAF2Q8N183 169 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 MTMR14Q8NCE2 650 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 RBM15BQ8NDT2 890 aaKnown RBP20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 COPS5Q92905 334 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 ALKBH8Q96BT7 664 aaKnown RBP20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 LPIN3Q9BQK8 851 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 MIS12Q9H081 205 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 PRPSAP2O60256 369 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 MRPS5P82675 430 aaKnown RBP20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 CASC4Q6P4E1 433 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 NUDCD3Q8IVD9 361 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 CPB2Q96IY4 423 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 FAM49BQ9NUQ9 324 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 TTLL3Q9Y4R7 772 aa20.35■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZCCHC18P0CG32 403 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 GMPSP49915 693 aaPredicted RBP20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 WDR78Q5VTH9 848 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 PPP1R2P3Q6NXS1 205 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 PPP1R14CQ8TAE6 165 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 USP6NLQ92738 828 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 E2F7Q96AV8 911 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 APOL6Q9BWW8 343 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 TMEM134Q9H6X4 195 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 ARHGEF4Q9NR80 690 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 LGR5O75473 907 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 ARIH2O95376 493 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 IQCF3P0C7M6 154 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 TFE3P19532 575 aaPredicted RBP20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 KCNA3P22001 575 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 JADE1Q6IE81 842 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 ZPBP2Q6X784 338 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 SLC26A11Q86WA9 606 aa20.34■□□□□ 0.85
CNEP1R1-203ENST00000458059 CMASQ8NFW8 434 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms