RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SCN4BQ8IWT1 228 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 TXLNBQ8N3L3 684 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 NIPA2Q8N8Q9 360 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 ADAM32Q8TC27 787 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 IPO4Q8TEX9 1081 aaKnown RBP9.16□□□□□ -0.94
RIF1-208ENST00000457745 PIK3R5Q8WYR1 880 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 EDEM1Q92611 657 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 SMARCD1Q96GM5 515 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 HSFY1Q96LI6 401 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 RNPC3Q96LT9 517 aaKnown RBP9.16□□□□□ -0.94
RIF1-208ENST00000457745 ZNF558Q96NG5 402 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 SLC2A13Q96QE2 648 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 PNKPQ96T60 521 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 YME1L1Q96TA2 773 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 FAM118BQ9BPY3 351 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 C17orf80Q9BSJ5 609 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 TTPALQ9BTX7 342 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 SYNCQ9H7C4 482 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 ZWILCHQ9H900 591 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 PCSK1NQ9UHG2 260 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 NUDT5Q9UKK9 219 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 STRIP2Q9ULQ0 834 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
RIF1-208ENST00000457745 MFHAS1Q9Y4C4 1052 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.16□□□□□ -0.94
RIF1-208ENST00000457745 SNX10Q9Y5X0 201 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 SCINQ9Y6U3 715 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 MYO7AQ13402 2215 aa9.16□□□□□ -0.94
RIF1-208ENST00000457745 LINC01553A4QN01 128 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 ZSCAN5CA6NGD5 496 aaPredicted RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 MYO1FO00160 1098 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 MDM4O15151 490 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 TRUB2O95900 331 aaKnown RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 SOD2P04179 222 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 HAPLN1P10915 354 aaPredicted RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 KRT10P13645 584 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 PDGFRAP16234 1089 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 TCP1P17987 556 aaKnown RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 OR1D2P34982 312 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 GTF2F1P35269 517 aaKnown RBP eCLIP9.15□□□□□ -0.94
RIF1-208ENST00000457745 ZNF143P52747 638 aaPredicted RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 SLC5A3P53794 718 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 ERVFC1P60507 584 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 DUSP4Q13115 394 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 GPR17Q13304 367 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 CAMK1Q14012 370 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 TRADDQ15628 312 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 IFI16Q16666 785 aaKnown RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 ZC3H12AQ5D1E8 599 aaKnown RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 KCNT1Q5JUK3 1230 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 SPOUT1Q5T280 376 aaKnown RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 ZNF280DQ6N043 979 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 SPATA2LQ8IUW3 424 aaPredicted RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 SYCE1Q8N0S2 351 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 THEM5Q8N1Q8 247 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 PYROXD2Q8N2H3 581 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 CCDC185Q8N715 623 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 PRELID2Q8N945 189 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 FNIP1Q8TF40 1166 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 NPY6RQ99463 290 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 DDX23Q9BUQ8 820 aaKnown RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 ZBP1Q9H171 429 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 ANKZF1Q9H8Y5 726 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 MRPL47Q9HD33 250 aaKnown RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 DMAP1Q9NPF5 467 aaPredicted RBP9.15□□□□□ -0.94
RIF1-208ENST00000457745 WDR35Q9P2L0 1181 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 IP6K2Q9UHH9 426 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 USP3Q9Y6I4 520 aa9.15□□□□□ -0.94
RIF1-208ENST00000457745 ANAPC1Q9H1A4 1944 aa9.15□□□□□ -0.95
RIF1-208ENST00000457745 EPOPA6NHQ4 379 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 CCDC85CA6NKD9 419 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 OR6C75A6NL08 312 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 FGF18O76093 207 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 FGGP02679 453 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 KRT1P04264 644 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 SPATA31D3P0C874 917 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 RARAP10276 462 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 CPB1P15086 417 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 ATP2A2P16615 1042 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 LAG3P18627 525 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 IRS1P35568 1242 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 GGCXP38435 758 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 MLLT3P42568 568 aaPredicted RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 SSR1P43307 286 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 ALDH7A1P49419 539 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 GLUD2P49448 558 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 TSPY1Q01534 308 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 DSG1Q02413 1049 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 CFAP221Q4G0U5 840 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 C6orf132Q5T0Z8 1188 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 SLC8B1Q6J4K2 584 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 PSRC1Q6PGN9 363 aaPredicted RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 SPATA31D4Q6ZUB0 917 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 DDX53Q86TM3 631 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 PRUNE1Q86TP1 453 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 TAC4Q86UU9 113 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 SLC13A5Q86YT5 568 aaPredicted RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 VPS52Q8N1B4 723 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 NETO2Q8NC67 525 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms