RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 KIZQ2M2Z5 673 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 FAM47EQ6ZV65 393 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 RTP4Q96DX8 246 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 MS4A4AQ96JQ5 239 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 KLHL14Q9P2G3 628 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 SNX9Q9Y5X1 595 aa19.16■□□□□ 0.66
SEMA3B-209ENST00000456560 BTBD19C9JJ37 291 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 ATP11AP98196 1134 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 KRT81Q14533 505 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 C1orf228Q6PIY5 440 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 VSIG1Q86XK7 387 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 TBCBQ99426 244 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 ADAM33Q9BZ11 813 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 PCDH18Q9HCL0 1135 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 SETD4Q9NVD3 440 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 H7C0C1 242 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 PAPSS1O43252 624 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 KRT4P19013 534 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 ATP5OP48047 213 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 DNAJC3Q13217 504 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC9A4Q6AI14 798 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 SLC27A1Q6PCB7 646 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 ECHDC2Q86YB7 292 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 LRRC52Q8N7C0 313 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 ANKLE1Q8NAG6 615 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 STK32AQ8WU08 396 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 FAM172AQ8WUF8 416 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 ECT2Q9H8V3 914 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 GPATCH2LQ9NWQ4 482 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 TUBGCP4Q9UGJ1 667 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 TEX264Q9Y6I9 313 aa19.15■□□□□ 0.66
SEMA3B-209ENST00000456560 CHADO15335 359 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 GPR32O75388 356 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 CELF2O95319 508 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 TGM2P21980 687 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 GBP2P32456 591 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 ELK3P41970 407 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 MSH2P43246 934 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 CLNS1AP54105 237 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 CCDC15Q0P6D6 951 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 DGKDQ16760 1214 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 ARHGAP17Q68EM7 881 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 TLDC1Q6P9B6 456 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 ALKAL1Q6UXT8 129 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 SESTD1Q86VW0 696 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 UNC93AQ86WB7 457 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 SCUBE3Q8IX30 993 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 OR6J1Q8NGC5 347 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 PCDH19Q8TAB3 1148 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 SPOCK2Q92563 424 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 MAML3Q96JK9 1138 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 EIF2AQ9BY44 585 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 FAM49BQ9NUQ9 324 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 PHTF1Q9UMS5 762 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 CHMP2BQ9UQN3 213 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 KAT6AQ92794 2004 aa19.14■□□□□ 0.65
SEMA3B-209ENST00000456560 RRN3P2A6NIE6 340 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 RPSAP08865 295 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 SDC4P31431 198 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 GCLCP48506 637 aaPredicted RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 MTM1Q13496 603 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 CA9Q16790 459 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 SCYL2Q6P3W7 929 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 APBB1IPQ7Z5R6 666 aaPredicted RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 MIEF2Q96C03 454 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 FAF2Q96CS3 445 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 SNRNP25Q9BV90 132 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 GCOM2Q9BZD3 368 aaPredicted RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 CDHR5Q9HBB8 845 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 NGRNQ9NPE2 291 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 PAK5Q9P286 719 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 BCLAF3A2AJT9 711 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 APOL1O14791 398 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 MDM4O15151 490 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 EDF1O60869 148 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 PIAS1O75925 651 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 ZWINTO95229 277 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 ATP2A2P16615 1042 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 RIPK1Q13546 671 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 GRB14Q14449 540 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 ACCSLQ4AC99 568 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 HHATQ5VTY9 493 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 GPR142Q7Z601 462 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 DPP9Q86TI2 863 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 C18orf25Q96B23 403 aaPredicted RBP19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 CYTH2Q99418 400 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 HESX1Q9UBX0 185 aa19.13■□□□□ 0.65
SEMA3B-209ENST00000456560 CFAP69A5D8W1 941 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 ZNF487B1APH4 448 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 ADCY6O43306 1168 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 HDAC4P56524 1084 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 BCAR1P56945 870 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 TMEM62Q0P6H9 643 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 SOWAHAQ2M3V2 549 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 IQSEC1Q6DN90 963 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 LVRNQ6Q4G3 990 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 CATSPER4Q7RTX7 472 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 ZDHHC17Q8IUH5 632 aa19.12■□□□□ 0.65
SEMA3B-209ENST00000456560 AGGF1Q8N302 714 aaeCLIP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms