RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CROCCP2Q86T23 111 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 CCDC13Q8IYE1 715 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 CMASQ8NFW8 434 aaPredicted RBP14.25□□□□□ -0.13
CLK3-203ENST00000454830 ADAM32Q8TC27 787 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 ARHGEF2Q92974 986 aaKnown RBP14.25□□□□□ -0.13
CLK3-203ENST00000454830 PAIP2Q9BPZ3 127 aaKnown RBP14.25□□□□□ -0.13
CLK3-203ENST00000454830 FAM129AQ9BZQ8 928 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 PCDH9Q9HC56 1237 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 DRG1Q9Y295 367 aaKnown RBP14.25□□□□□ -0.13
CLK3-203ENST00000454830 A6NNZ2 444 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 CREB3O43889 395 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 ITGAVP06756 1048 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 FAM200BP0CF97 657 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 TM4SF4P48230 202 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 DPYSL3Q14195 570 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 FASTKD3Q14CZ7 662 aaKnown RBP14.25□□□□□ -0.13
CLK3-203ENST00000454830 OASLQ15646 514 aaKnown RBP14.25□□□□□ -0.13
CLK3-203ENST00000454830 TUBB8Q3ZCM7 444 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 ARHGAP17Q68EM7 881 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 TAOK1Q7L7X3 1001 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 CPLX4Q7Z7G2 160 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 CD99L2Q8TCZ2 262 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 GDAP2Q9NXN4 497 aa14.25□□□□□ -0.13
CLK3-203ENST00000454830 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 PIAS1O75925 651 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 RPL22P35268 128 aaKnown RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 ACADSBP45954 432 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 BRCC3P46736 316 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 TKTL1P51854 596 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 ITGA7Q13683 1181 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 LRRC14Q15048 493 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 HIF1AQ16665 826 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 RNF180Q86T96 592 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 SERINC5Q86VE9 423 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 CRYBG2Q8N1P7 616 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 SLC35B2Q8TB61 432 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 NKD2Q969F2 451 aaPredicted RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 TBCBQ99426 244 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 INTS9Q9NV88 658 aaKnown RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 AP4E1Q9UPM8 1137 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 BEST1O76090 585 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 NOGQ13253 232 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 SPDYCQ5MJ68 293 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 HIBCHQ6NVY1 386 aaPredicted RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 PALM2Q8IXS6 379 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 SRRM1Q8IYB3 904 aaKnown RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 FUKQ8N0W3 1084 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 SMC1BQ8NDV3 1235 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 PYROXD1Q8WU10 500 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 FAF2Q96CS3 445 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 GLT1D1Q96MS3 346 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 RNF157Q96PX1 679 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 CHN1P15882 459 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 NPR3P17342 541 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 KRT15P19012 456 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 ARL4AP40617 200 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 GAD2Q05329 585 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 AUHQ13825 339 aaKnown RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 CTU1Q7Z7A3 348 aaKnown RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 TOP6BLQ8N6T0 577 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 PCSK9Q8NBP7 692 aaKnown RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 SENP6Q9GZR1 1112 aaPredicted RBP14.24□□□□□ -0.13
CLK3-203ENST00000454830 PCDH18Q9HCL0 1135 aa14.24□□□□□ -0.13
CLK3-203ENST00000454830 MYBPHLA2RUH7 354 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 M0QYT0 321 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 GABBR2O75899 941 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 HDAC4P56524 1084 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 EFHC1Q5JVL4 640 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 AGMOQ6ZNB7 445 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 CEP128Q6ZU80 1094 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 METTL23Q86XA0 190 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 ZCCHC9Q8N567 271 aaKnown RBP14.23□□□□□ -0.13
CLK3-203ENST00000454830 RNF34Q969K3 372 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 CAPNS2Q96L46 248 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 PPP1R10Q96QC0 940 aaKnown RBP14.23□□□□□ -0.13
CLK3-203ENST00000454830 RAB6BQ9NRW1 208 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 XPO7Q9UIA9 1087 aaKnown RBP14.23□□□□□ -0.13
CLK3-203ENST00000454830 TP73O15350 636 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 AGTP01019 485 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 CYP2F1P24903 491 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 PKDCCQ504Y2 493 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 ERMARDQ5T6L9 678 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 ANKRD22Q5VYY1 191 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 KCNK16Q96T55 309 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 DUSP16Q9BY84 665 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 FAM124BQ9H5Z6 455 aaPredicted RBP14.23□□□□□ -0.13
CLK3-203ENST00000454830 SEPT10Q9P0V9 454 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 SHOX2O60902 331 aaPredicted RBP14.23□□□□□ -0.13
CLK3-203ENST00000454830 VIMP08670 466 aaKnown RBP14.23□□□□□ -0.13
CLK3-203ENST00000454830 ARL4CP56559 192 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 MORF4L2Q15014 288 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 PDK2Q15119 407 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 ANKRD20A8PQ5CZ79 823 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 ZDHHC17Q8IUH5 632 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 SLC7A14Q8TBB6 771 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 RHOBTB2Q9BYZ6 727 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 GRIN2DO15399 1336 aa14.23□□□□□ -0.13
CLK3-203ENST00000454830 RNASELQ05823 741 aaKnown RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 DRICH1Q6PGQ1 229 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms