RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PIGZQ86VD9 579 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 FAM131BQ86XD5 332 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 GDAP1Q8TB36 358 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 PRCCQ92733 491 aaPredicted RBP12.29□□□□□ -0.44
VTA1-203ENST00000452973 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
VTA1-203ENST00000452973 FAM105AQ9NUU6 356 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 GTF2IRD1Q9UHL9 959 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 TMEM120BA0PK00 339 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 MYO1CO00159 1063 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 KCNN4O15554 427 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 CHRNA1P02708 482 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 CLCNKBP51801 687 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 SNX16P57768 344 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PRKCZQ05513 592 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 MSS51Q4VC12 460 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 DCAF6Q58WW2 860 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 ARHGAP17Q68EM7 881 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 CRYBG2Q8N1P7 616 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 HASPINQ8TF76 798 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 TNIP3Q96KP6 325 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PAAF1Q9BRP4 392 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 AGO3Q9H9G7 860 aaKnown RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 PCDH18Q9HCL0 1135 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 MIOSQ9NXC5 875 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 XPO7Q9UIA9 1087 aaKnown RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 Q9Y3F1 56 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 F5H423 210 aaPredicted RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 VIMP08670 466 aaKnown RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 GHRP10912 638 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 BRAFP15056 766 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 IL4RP24394 825 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 SSTR1P30872 391 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 SCNN1GP51170 649 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 INHBEP58166 350 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 TFDP2Q14188 446 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 ANKRD20A8PQ5CZ79 823 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 RNF187Q5TA31 235 aaPredicted RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 RSPH3Q86UC2 560 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PYROXD2Q8N2H3 581 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PLD5Q8N7P1 536 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PCDH19Q8TAB3 1148 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 TMPRSS4Q9NRS4 437 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 GDAP2Q9NXN4 497 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 INPP5FQ9Y2H2 1132 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 TRPV2Q9Y5S1 764 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 NR2E3Q9Y5X4 410 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 APOL1O14791 398 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 POMCP01189 267 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 ASGR1P07306 291 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 SETSIPP0DME0 302 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 FCGRTP55899 365 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 MAP3K7CLP57077 242 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PITX1P78337 314 aaPredicted RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 SREBF2Q12772 1141 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 IFT88Q13099 833 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 TAZQ16635 292 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 ERMARDQ5T6L9 678 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 MFSD5Q6N075 450 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 CTU1Q7Z7A3 348 aaKnown RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 PPIL6Q8IXY8 311 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 FUKQ8N0W3 1084 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PYROXD1Q8WU10 500 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 SENP8Q96LD8 212 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 TBCBQ99426 244 aa12.28□□□□□ -0.44
VTA1-203ENST00000452973 PAIP2Q9BPZ3 127 aaKnown RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 DDX43Q9NXZ2 648 aaKnown RBP12.28□□□□□ -0.44
VTA1-203ENST00000452973 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.44
VTA1-203ENST00000452973 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.44
VTA1-203ENST00000452973 AVILO75366 819 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 TMEM63AO94886 807 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 THP07101 528 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 CYBAP13498 195 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 PTPN1P18031 435 aaKnown RBP12.27□□□□□ -0.44
VTA1-203ENST00000452973 RBL1P28749 1068 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 CD52P31358 61 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 SLC8A3P57103 927 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 NME3Q13232 169 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 DSTYKQ6XUX3 929 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 CCDC185Q8N715 623 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 LRRC4Q9HBW1 653 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 XPNPEP3Q9NQH7 507 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 SHOC2Q9UQ13 582 aa12.27□□□□□ -0.44
VTA1-203ENST00000452973 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 RASA4BC9J798 803 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 RASA4O43374 803 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 CDH16O75309 829 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 KRT15P19012 456 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
VTA1-203ENST00000452973 RDXP35241 583 aaKnown RBP12.27□□□□□ -0.45
VTA1-203ENST00000452973 STAT4Q14765 748 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 DEFB106AQ8N104 65 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 PQLC3Q8N755 202 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 ADAM32Q8TC27 787 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 CHMP6Q96FZ7 201 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
VTA1-203ENST00000452973 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.45
VTA1-203ENST00000452973 RAB6BQ9NRW1 208 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 AP4E1Q9UPM8 1137 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms