RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 C1orf210Q8IVY1 113 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 RBBP8NLQ8NC74 664 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 TTC8Q8TAM2 541 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 KCTD13Q8WZ19 329 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 PHOX2BQ99453 314 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 TUBGCP2Q9BSJ2 902 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 DNAI2Q9GZS0 605 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 HSD3B7Q9H2F3 369 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 CHRDQ9H2X0 955 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 NDST4Q9H3R1 872 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 ECT2Q9H8V3 914 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 UBE2TQ9NPD8 197 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 DUS2Q9NX74 493 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 CLIC5Q9NZA1 410 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 AJAP1Q9UKB5 411 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 PATJQ8NI35 1801 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 TICRRQ7Z2Z1 1910 aa16.98■□□□□ 0.31
SCAMP4-205ENST00000452128 E2F8A0AVK6 867 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 H0Y858 1186 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 TLR5O60602 858 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 ABL1P00519 1130 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 KPNA1P52294 538 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 CCINQ13939 588 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 NCAPHQ15003 741 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 EXOC3L4Q17RC7 722 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 VWA3BQ502W6 1294 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 TCP11X2Q5H9J9 407 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 NAIF1Q69YI7 327 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 SCML4Q8N228 414 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 UBA3Q8TBC4 463 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 SHC3Q92529 594 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 NELL1Q92832 810 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 LMAN1LQ9HAT1 526 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 TLR8Q9NR97 1041 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 SMPD4Q9NXE4 827 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 CFAP97Q9P2B7 532 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 NFE2L3Q9Y4A8 694 aa16.97■□□□□ 0.31
SCAMP4-205ENST00000452128 LRRC10BA6NIK2 292 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 CHRM1P11229 460 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 TDGF1P13385 188 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 CD19P15391 556 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 BRD2P25440 801 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 GJA4P35212 333 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 MTIF2P46199 727 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 BCAT1P54687 386 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 BST2Q10589 180 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 PMF1Q6P1K2 205 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 CC2D1AQ6P1N0 951 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 RHBDF2Q6PJF5 856 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 ENOSF1Q7L5Y1 443 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 FAM114A1Q8IWE2 563 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 NDRG1Q92597 394 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 EZH1Q92800 747 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 APEX2Q9UBZ4 518 aa16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 NDRG2Q9UN36 371 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-205ENST00000452128 ZFHX2Q9C0A1 2572 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 KCNJ18B7U540 433 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 PROB1E7EW31 1015 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 NCAM2O15394 837 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 SETSIPP0DME0 302 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 MBL2P11226 248 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 RARGP13631 454 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 EEF1GP26641 437 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 GPD2P43304 727 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 PSEN1P49768 467 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 GALK1P51570 392 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 MTAPQ13126 283 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 KCNJ12Q14500 433 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 MEA1Q16626 185 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 HSP90AA4PQ58FG1 418 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 FSTL4Q6MZW2 842 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 HTR3DQ70Z44 454 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 APTXQ7Z2E3 356 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 DDX42Q86XP3 938 aaKnown RBP eCLIP16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 FAM122AQ96E09 287 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 IRF2BPLQ9H1B7 796 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 ACP6Q9NPH0 428 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 PRMT8Q9NR22 394 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 USP34Q70CQ2 3546 aa16.95■□□□□ 0.3
SCAMP4-205ENST00000452128 ZBED1O96006 694 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 ZNF18P17022 549 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 RFX1P22670 979 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 ATP5C1P36542 298 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 OPRD1P41143 372 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 NBL1P41271 181 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 TKTL1P51854 596 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 MFAP3P55082 362 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 PON2Q15165 354 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 STILQ15468 1287 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 TPD52L1Q16890 204 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 Q6ZNB5 142 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 CREBRFQ8IUR6 639 aa16.94■□□□□ 0.3
SCAMP4-205ENST00000452128 ZNF606Q8WXB4 792 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms