RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 FOXD4Q12950 439 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 PKN2Q16513 984 aaKnown RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 GPR162Q16538 588 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 TAZQ16635 292 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC14Q49A88 953 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 NUGGCQ68CJ6 796 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 ZNF410Q86VK4 478 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 C4orf33Q8N1A6 199 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC197Q8NCU1 140 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 MAML1Q92585 1016 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 CNPY3Q9BT09 278 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 MAK16Q9BXY0 300 aaKnown RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 GCOM2Q9BZD3 368 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 EURLQ9NYK6 297 aa12.6□□□□□ -0.39
COL27A1-202ENST00000451716 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-202ENST00000451716 IQCA1LA6NCM1 817 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 ALOX15BO15296 676 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 PRPSAP2O60256 369 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CYP2C9P11712 490 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 ATXN1P54253 815 aaKnown RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 GPX6P59796 221 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CA9Q16790 459 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC142Q17RM4 750 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 SLC27A1Q6PCB7 646 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 DARS2Q6PI48 645 aaKnown RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CENPUQ71F23 418 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 PIGWQ7Z7B1 504 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 SNX27Q96L92 541 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 WDR83Q9BRX9 315 aaKnown RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 GBA2Q9HCG7 927 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 FLRT1Q9NZU1 646 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 LGALS13Q9UHV8 139 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 ATXN2Q99700 1313 aaKnown RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 LAMA2P24043 3122 aaKnown RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 APOC4-APOC2K7ER74 178 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 HGSO14964 777 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 MCF2LO15068 1137 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 APOC2P02655 101 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC130P13994 396 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 LMO2P25791 158 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 ADORA2BP29275 332 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 DPYSL3Q14195 570 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 KYAT1Q16773 422 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 FAM81AQ8TBF8 368 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 FAM172AQ8WUF8 416 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CCDC134Q9H6E4 229 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 SAMD15Q9P1V8 674 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 PIN4Q9Y237 131 aaKnown RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 EFR3BQ9Y2G0 817 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CLUHO75153 1309 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 TRIP12Q14669 1992 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 A8MXQ7 604 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 PAPSS1O43252 624 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 KRT15P19012 456 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 STX2P32856 288 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 BEX3Q00994 111 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 KRT81Q14533 505 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 CCL14Q16627 93 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 ANKRD20A8PQ5CZ79 823 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 PPP6R3Q5H9R7 873 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 OLFML2BQ68BL8 750 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 IQSEC1Q6DN90 963 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 PPIL6Q8IXY8 311 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 NAT8LQ8N9F0 302 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL27A1-202ENST00000451716 ZSWIM8A7E2V4 1837 aa12.59□□□□□ -0.39
COL27A1-202ENST00000451716 A0A1W2PPM1 405 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 H7C0C1 242 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 SPTLC1O15269 473 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 TREHO43280 583 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 ATP6V1G1O75348 118 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 CELF2O95319 508 aaKnown RBP12.58□□□□□ -0.4
COL27A1-202ENST00000451716 ABHD2P08910 425 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
COL27A1-202ENST00000451716 PCK1P35558 622 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 ATP5OP48047 213 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 DCAF4L1Q3SXM0 396 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 PYROXD1Q8WU10 500 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 CCT6BQ92526 530 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 P3H4Q92791 437 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 FOXP3Q9BZS1 431 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 XPO7Q9UIA9 1087 aaKnown RBP12.58□□□□□ -0.4
COL27A1-202ENST00000451716 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.58□□□□□ -0.4
COL27A1-202ENST00000451716 AVILO75366 819 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 FSBPO95073 299 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 FGFR1P11362 822 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 IL4RP24394 825 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 ZBTB6Q15916 424 aa12.58□□□□□ -0.4
COL27A1-202ENST00000451716 FAM110CQ1W6H9 321 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms