RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 IRF7Q92985 503 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 ZFRQ96KR1 1074 aaKnown RBP15.11■□□□□ 0.01
COL3A1-203ENST00000450867 SLC4A5Q9BY07 1137 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 SMG9Q9H0W8 520 aaKnown RBP15.11■□□□□ 0.01
COL3A1-203ENST00000450867 LHX5Q9H2C1 402 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 TSPY26PQ9H489 355 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 NMUR1Q9HB89 426 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 CNGB3Q9NQW8 809 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL3A1-203ENST00000450867 OSER1Q9NX31 292 aa15.11■□□□□ 0.01
COL3A1-203ENST00000450867 PRR33A8MZF0 331 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 COCHO43405 550 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 TLR5O60602 858 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 PNMA6AP0CW24 399 aaPredicted RBP15.1■□□□□ 0.01
COL3A1-203ENST00000450867 POLR2FP61218 127 aaKnown RBP15.1■□□□□ 0.01
COL3A1-203ENST00000450867 ZXDBP98169 803 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 ADIGQ0VDE8 80 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 GRM2Q14416 872 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 FILIP1LQ4L180 1135 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 DENND1BQ6P3S1 775 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 SLC47A2Q86VL8 602 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 IRGQQ8WZA9 623 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 DDX1Q92499 740 aaKnown RBP15.1■□□□□ 0.01
COL3A1-203ENST00000450867 NAP1L5Q96NT1 182 aaPredicted RBP15.1■□□□□ 0.01
COL3A1-203ENST00000450867 FAM83CQ9BQN1 747 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
COL3A1-203ENST00000450867 ULBP1Q9BZM6 244 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 CCSER2Q9H7U1 834 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 BRD9Q9H8M2 597 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 LRRC4Q9HBW1 653 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 CYTH4Q9UIA0 394 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 MYO6Q9UM54 1294 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 MYOFQ9NZM1 2061 aa15.1■□□□□ 0.01
COL3A1-203ENST00000450867 A0A1W2PQH9 124 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 KRBA1A5PL33 1030 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 GOLGA6L19H0YKK7 550 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 ZNF263O14978 683 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 FBXO21O94952 628 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 CFHP08603 1231 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 CYP11B1P15538 503 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 GDI1P31150 447 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 CDH5P33151 784 aaPredicted RBP15.09■□□□□ 0.01
COL3A1-203ENST00000450867 SOX5P35711 763 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 PBX1P40424 430 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 ACADSBP45954 432 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 DAOAP59103 153 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 FANCCQ00597 558 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 PRKCQQ04759 706 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 TMEM31Q5JXX7 168 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 TMEM110Q86TL2 294 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 DDX42Q86XP3 938 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL3A1-203ENST00000450867 ZNF677Q86XU0 584 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 WDTC1Q8N5D0 677 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 EPS8L1Q8TE68 723 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 SH3RF2Q8TEC5 729 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 CDK5RAP1Q96SZ6 601 aaKnown RBP15.09■□□□□ 0.01
COL3A1-203ENST00000450867 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 THG1LQ9NWX6 298 aaKnown RBP15.09■□□□□ 0.01
COL3A1-203ENST00000450867 CPQQ9Y646 472 aa15.09■□□□□ 0.01
COL3A1-203ENST00000450867 KIAA1549LQ6ZVL6 1849 aa15.08■□□□□ 0.01
COL3A1-203ENST00000450867 SHISA7A6NL88 538 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 LEFTY2O00292 366 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 ABL1P00519 1130 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 RARGP13631 454 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 GLULP15104 373 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 STARD6P59095 220 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 PDCLQ13371 301 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 MTF1Q14872 753 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 FIGNQ5HY92 759 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 GPIHBP1Q8IV16 184 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 YAF2Q8IY57 180 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 SIX6OS1Q8N1H7 587 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 EDEM3Q9BZQ6 932 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 TTYH3Q9C0H2 523 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 NAGPAQ9UK23 515 aa15.08■□□□□ 0
COL3A1-203ENST00000450867 NOCTQ9UK39 431 aaKnown RBP15.08■□□□□ 0
COL3A1-203ENST00000450867 E2F8A0AVK6 867 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 YJEFN3A6XGL0 299 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 E7ENQ6 273 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 SART1O43290 800 aaKnown RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 LSM8O95777 96 aaKnown RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 SERPINC1P01008 464 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 MBL2P11226 248 aaPredicted RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 ATP5C1P36542 298 aaKnown RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 STAT1P42224 750 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 RGS7P49802 495 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 YWHAGP61981 247 aaKnown RBP eCLIP15.07■□□□□ 0
COL3A1-203ENST00000450867 PDGFRLQ15198 375 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 MLF2Q15773 248 aaPredicted RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 SLC44A4Q53GD3 710 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 IER5LQ5T953 404 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 HFE2Q6ZVN8 426 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 BEND5Q7L4P6 421 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 TADA2BQ86TJ2 420 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 NOP9Q86U38 636 aaKnown RBP15.07■□□□□ 0
COL3A1-203ENST00000450867 SIX5Q8N196 739 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 OSCP1Q8WVF1 389 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 BAP1Q92560 729 aa15.07■□□□□ 0
COL3A1-203ENST00000450867 MSANTD3Q96H12 275 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms