RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 RCCD1A6NED2 376 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 SIGLEC16A6NMB1 481 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 YJEFN3A6XGL0 299 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 E7ENQ6 273 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 ZSCAN12O43309 604 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 HSF2BPO75031 334 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 KRT3P12035 628 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 PTPN2P17706 415 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 PSEN1P49768 467 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 YWHAGP61981 247 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHANK2-210ENST00000449116 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 COL19A1Q14993 1142 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 TAF5Q15542 800 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 CTC1Q2NKJ3 1217 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 MON1AQ86VX9 555 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 TMC8Q8IU68 726 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 RHOT2Q8IXI1 618 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 C12orf76Q8N812 135 aaPredicted RBP15.35■□□□□ 0.05
SHANK2-210ENST00000449116 RFFLQ8WZ73 363 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 FAM149B1Q96BN6 582 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 GUCD1Q96NT3 240 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 CORO1BQ9BR76 489 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 TRIM62Q9BVG3 475 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 NUP85Q9BW27 656 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 LRRC3Q9BY71 257 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 TSGA10Q9BZW7 698 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 LACRTQ9GZZ8 138 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 ZNF334Q9HCZ1 680 aaPredicted RBP15.35■□□□□ 0.05
SHANK2-210ENST00000449116 TLR8Q9NR97 1041 aaKnown RBP15.35■□□□□ 0.05
SHANK2-210ENST00000449116 METTL5Q9NRN9 209 aaKnown RBP15.35■□□□□ 0.05
SHANK2-210ENST00000449116 CTTNBP2NLQ9P2B4 639 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 UVRAGQ9P2Y5 699 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 CHORDC1Q9UHD1 332 aaPredicted RBP15.35■□□□□ 0.05
SHANK2-210ENST00000449116 TFR2Q9UP52 801 aa15.35■□□□□ 0.05
SHANK2-210ENST00000449116 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 A0A1W2PQH9 124 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 BTNL10A8MVZ5 291 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 DAB1O75553 588 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 GRAP2O75791 330 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 GJB6O95452 261 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 FGF19O95750 216 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 LTFP02788 710 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 ZDHHC11BP0C7U3 371 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 HOXB8P17481 243 aaPredicted RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 PPP3CCP48454 512 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 EPHA5P54756 1037 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 YWHAZP63104 245 aaKnown RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 TCEAL1Q15170 157 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 PABPC1LQ4VXU2 614 aaKnown RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 PPP1R15BQ5SWA1 713 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 BSPRYQ5W0U4 402 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 DCUN1D2Q6PH85 259 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 ZNF662Q6ZS27 426 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 HFE2Q6ZVN8 426 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 ARCQ7LC44 396 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 SCD5Q86SK9 330 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 HS6ST3Q8IZP7 471 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 LEMD2Q8NC56 503 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 ZNF564Q8TBZ8 553 aaPredicted RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 SMG7Q92540 1137 aaKnown RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 KHSRPQ92945 711 aaKnown RBP eCLIP15.34■□□□□ 0.056e-7■■■□□ 16.4
SHANK2-210ENST00000449116 PABPC5Q96DU9 382 aaKnown RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 MCEEQ96PE7 176 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 PIDD1Q9HB75 910 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 NMUR1Q9HB89 426 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 IL21Q9HBE4 155 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 POPDC2Q9HBU9 364 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 HCFC1R1Q9NWW0 138 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 CLDND1Q9NY35 253 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 TRPM5Q9NZQ8 1165 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 DNMT3BQ9UBC3 853 aaKnown RBP15.34■□□□□ 0.05
SHANK2-210ENST00000449116 TMEM59LQ9UK28 342 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 GREB1Q4ZG55 1949 aa15.34■□□□□ 0.05
SHANK2-210ENST00000449116 A0A0U1RQJ8 604 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 ZNF840PA6NDX5 716 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 KRT86O43790 486 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 TBX10O75333 385 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 TADA3O75528 432 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 F11P03951 625 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 RHOP08100 348 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 FOSL2P15408 326 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 GABRR2P28476 465 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 CDC25CP30307 473 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 RNASE9P60153 205 aaKnown RBP15.33■□□□□ 0.04
SHANK2-210ENST00000449116 RARS2Q5T160 578 aaKnown RBP15.33■□□□□ 0.04
SHANK2-210ENST00000449116 SNX30Q5VWJ9 437 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 BTBD8Q5XKL5 378 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 SYCE2Q6PIF2 218 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 TMC5Q6UXY8 1006 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 PDZD4Q76G19 769 aaPredicted RBP15.33■□□□□ 0.04
SHANK2-210ENST00000449116 BEND5Q7L4P6 421 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 SLC35G2Q8TBE7 412 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 FEZF2Q8TBJ5 459 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 ATRIPQ8WXE1 791 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 SLC2A13Q96QE2 648 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 GCNAQ96QF7 691 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 ABCC13Q9NSE7 274 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 CLIC5Q9NZA1 410 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 CLEC1BQ9P126 229 aa15.33■□□□□ 0.04
SHANK2-210ENST00000449116 MYO16Q9Y6X6 1858 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms