RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 TDRD5Q8NAT2 981 aaKnown RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 STKLD1Q8NE28 680 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 BLOC1S5Q8TDH9 187 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 STK32AQ8WU08 396 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 VPS33AQ96AX1 596 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 RMND5BQ96G75 393 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 ZFRQ96KR1 1074 aaKnown RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 KATNAL1Q9BW62 490 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SPATA16Q9BXB7 569 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 TRPC7Q9HCX4 862 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 NMRK1Q9NWW6 199 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 NEURL4Q96JN8 1562 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 LINC00854A0A1B0GVQ3 168 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 C2orf81A6NN90 581 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 TRIM24O15164 1050 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 CAMTA2O94983 1202 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SERPINE1P05121 402 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 C4BPBP20851 252 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 MAPK1P28482 360 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 PWP1Q13610 501 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 ANGPT1Q15389 498 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 RINLQ6ZS11 566 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 HS6ST3Q8IZP7 471 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 LRRN4CLQ8ND94 238 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 TAS1R2Q8TE23 839 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 FAM172AQ8WUF8 416 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 HDAC7Q8WUI4 952 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SLC20A1Q8WUM9 679 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SLC5A5Q92911 643 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 PNMA8BQ9ULN7 279 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 TMCC3Q9ULS5 477 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 ZMYND8Q9ULU4 1186 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 DRG1Q9Y295 367 aaKnown RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 RAD54BQ9Y620 910 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 DNALI1O14645 258 aaPredicted RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 MLNP12872 115 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 NCALDP61601 193 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 PRKAA1Q13131 559 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 GALNTL6Q49A17 601 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 NOTUMQ6P988 496 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 LRRC74BQ6ZQY2 392 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 ZCCHC7Q8N3Z6 543 aaKnown RBP8.02□□□□□ -1.13
NEDD9-204ENST00000448183 TCP10LQ8TDR4 215 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 PIK3R5Q8WYR1 880 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SLITRK1Q96PX8 696 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 DCLK3Q9C098 648 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SYTL2Q9HCH5 934 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 HPS4Q9NQG7 708 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 DIABLOQ9NR28 239 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 SAR1AQ9NR31 198 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 USP18Q9UMW8 372 aa8.02□□□□□ -1.13
NEDD9-204ENST00000448183 DIP2AQ14689 1571 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 RPS6KA5O75582 802 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 SMNDC1O75940 238 aaKnown RBP eCLIP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 CTSHP09668 335 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 FAM153BP0C7A2 387 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 CYP2C9P11712 490 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 RRM2P31350 389 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 NME5P56597 212 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 TBX2Q13207 712 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 DDX39BQ13838 428 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 NCF4Q15080 339 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 DGKDQ16760 1214 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 FAM153CQ494X1 144 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ZNF720Q7Z2F6 126 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ATP6V0D2Q8N8Y2 350 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 GDPD5Q8WTR4 605 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 OXNAD1Q96HP4 312 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 CGRRF1Q99675 332 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 CINPQ9BW66 212 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MTMR12Q9C0I1 747 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 GPRC5CQ9NQ84 441 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 KRT84Q9NSB2 600 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 DPP3Q9NY33 737 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 GPRC5DQ9NZD1 345 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 BTBD7Q9P203 1132 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MZF1P28698 734 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 RPL21P46778 160 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 NPTX2P47972 431 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 HARS2P49590 506 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 IFI35P80217 286 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 TIGD7Q6NT04 549 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ZFP1Q6P2D0 407 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 GLB1LQ6UWU2 654 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 SLFN11Q7Z7L1 901 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 DDX53Q86TM3 631 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 SLC47A2Q86VL8 602 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 HEATR4Q86WZ0 1026 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 EIF1ADQ8N9N8 165 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 USP13Q92995 863 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MPP4Q96JB8 637 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MAGED4Q96JG8 741 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 ZFP42Q96MM3 310 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 SEPT5Q99719 369 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 PAIP1Q9H074 479 aaKnown RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 MMADHCQ9H3L0 296 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-204ENST00000448183 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 LRRC4BQ9NT99 713 aa8.01□□□□□ -1.13
NEDD9-204ENST00000448183 THAP1Q9NVV9 213 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms