RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 C8AP07357 584 aa20.47■□□□□ 0.87
SGCE-207ENST00000447873 MTMR3Q13615 1198 aa20.47■□□□□ 0.87
SGCE-207ENST00000447873 TAF12Q16514 161 aa20.47■□□□□ 0.87
SGCE-207ENST00000447873 TLE6Q9H808 572 aa20.47■□□□□ 0.87
SGCE-207ENST00000447873 IP6K2Q9UHH9 426 aa20.47■□□□□ 0.87
SGCE-207ENST00000447873 LCMT1Q9UIC8 334 aa20.47■□□□□ 0.87
SGCE-207ENST00000447873 MAGED2Q9UNF1 606 aaPredicted RBP20.47■□□□□ 0.87
SGCE-207ENST00000447873 TRIOBPQ9H2D6 2365 aa20.47■□□□□ 0.87
SGCE-207ENST00000447873 LRG1P02750 347 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 LTFP02788 710 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 CSH1P0DML2 217 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 CSH2P0DML3 217 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 PDGFRAP16234 1089 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 ETF1P62495 437 aaKnown RBP20.46■□□□□ 0.87
SGCE-207ENST00000447873 ARCQ7LC44 396 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 ADGRD2Q7Z7M1 963 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 SLC35F6Q8N357 371 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 LRRC57Q8N9N7 239 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 FNIP1Q8TF40 1166 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 RXFP2Q8WXD0 754 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 FBXO32Q969P5 355 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 MRPL38Q96DV4 380 aaKnown RBP20.46■□□□□ 0.87
SGCE-207ENST00000447873 GOLPH3Q9H4A6 298 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 POPDC2Q9HBU9 364 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 FAM92AA1XBS5 289 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 C2CD4BA6NLJ0 364 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 KIF2AO00139 706 aaPredicted RBP20.46■□□□□ 0.87
SGCE-207ENST00000447873 TUBB4AP04350 444 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 GPD1P21695 349 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 PSMA2P25787 234 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 FLT3P36888 993 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 OGDHQ02218 1023 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 C11orf63Q6NUN7 778 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 HFE2Q6ZVN8 426 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 RTL10Q7L3V2 364 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 BHLHA9Q7RTU4 235 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 ITIH5Q86UX2 942 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 MON1AQ86VX9 555 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 PPP2R3CQ969Q6 453 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 SLITRK1Q96PX8 696 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 TRIM62Q9BVG3 475 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 PLEKHA4Q9H4M7 779 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 MAN1C1Q9NR34 630 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.46■□□□□ 0.87
SGCE-207ENST00000447873 DPP7Q9UHL4 492 aa20.46■□□□□ 0.87
SGCE-207ENST00000447873 CAPN9O14815 690 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 DAB1O75553 588 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 PROSCO94903 275 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 SDC4P31431 198 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 ZNF143P52747 638 aaPredicted RBP20.45■□□□□ 0.86
SGCE-207ENST00000447873 YWHAGP61981 247 aaKnown RBP eCLIP20.45■□□□□ 0.86
SGCE-207ENST00000447873 TAF10Q12962 218 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 PIGHQ14442 188 aaPredicted RBP20.45■□□□□ 0.86
SGCE-207ENST00000447873 PPM1LQ5SGD2 360 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 BSPRYQ5W0U4 402 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 DEFB106AQ8N104 65 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 ARHGAP18Q8N392 663 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.45■□□□□ 0.86
SGCE-207ENST00000447873 SLC22A17Q8WUG5 538 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 WDR24Q96S15 920 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 TTLL2Q9BWV7 592 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 DNAI1Q9UI46 699 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 ALG6Q9Y672 507 aa20.45■□□□□ 0.86
SGCE-207ENST00000447873 NCAM1P13591 858 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 TNNT1P13805 278 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 EPCAMP16422 314 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 DESP17661 470 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 MATKP42679 507 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 NRIP1P48552 1158 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 ZNF252P-AS1Q0IIN9 211 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 DUSP6Q16828 381 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 DCAF6Q58WW2 860 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 TRNP1Q6NT89 227 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 ELMSAN1Q6PJG2 1045 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 SYT10Q6XYQ8 523 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 DNAJB7Q7Z6W7 309 aaPredicted RBP20.44■□□□□ 0.86
SGCE-207ENST00000447873 SLFN11Q7Z7L1 901 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 HDAC7Q8WUI4 952 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 PSMG2Q969U7 264 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 SLC2A13Q96QE2 648 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 CNPY3Q9BT09 278 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 ASB3Q9Y575 518 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 HCFC2Q9Y5Z7 792 aa20.44■□□□□ 0.86
SGCE-207ENST00000447873 FTCDO95954 541 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 HMGA1P17096 107 aaKnown RBP20.43■□□□□ 0.86
SGCE-207ENST00000447873 COMTP21964 271 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 MAN1A1P33908 653 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 NOS2P35228 1153 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 SLC1A1P43005 524 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 PSEN1P49768 467 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 BTBD8Q5XKL5 378 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 PEX26Q7Z412 305 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 ELMOD1Q8N336 334 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 EDEM1Q92611 657 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 TRMT2BQ96GJ1 504 aaKnown RBP20.43■□□□□ 0.86
SGCE-207ENST00000447873 MYRFLQ96LU7 910 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 ZNF512Q96ME7 567 aaPredicted RBP20.43■□□□□ 0.86
SGCE-207ENST00000447873 CFAP57Q96MR6 1250 aa20.43■□□□□ 0.86
SGCE-207ENST00000447873 CDCA3Q99618 268 aaPredicted RBP20.43■□□□□ 0.86
SGCE-207ENST00000447873 TLR8Q9NR97 1041 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms