RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 FAM172AQ8WUF8 416 aa16.98■□□□□ 0.31
OTUB1-204ENST00000447683 TSPAN18Q96SJ8 248 aa16.98■□□□□ 0.31
OTUB1-204ENST00000447683 TRIM6Q9C030 488 aaPredicted RBP16.98■□□□□ 0.31
OTUB1-204ENST00000447683 MLXIPLQ9NP71 852 aa16.98■□□□□ 0.31
OTUB1-204ENST00000447683 ZNF487B1APH4 448 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 MDM4O15151 490 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 CD4P01730 458 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 ZNF865P0CJ78 1059 aaPredicted RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 STX2P32856 288 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PHBP35232 272 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 KRT81Q14533 505 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SNX17Q15036 470 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PKN2Q16513 984 aaKnown RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 FBXO47Q5MNV8 452 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 DARS2Q6PI48 645 aaKnown RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 TLK2Q86UE8 772 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 TAX1BP1Q86VP1 789 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SCUBE3Q8IX30 993 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PQLC3Q8N755 202 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PLD5Q8N7P1 536 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 C2orf69Q8N8R5 385 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PPP1R13LQ8WUF5 828 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 KBTBD7Q8WVZ9 684 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 TMEM40Q8WWA1 233 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 DNAJB3Q8WWF6 145 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 DPEP3Q9H4B8 488 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 USP29Q9HBJ7 922 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PCDH18Q9HCL0 1135 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 NGRNQ9NPE2 291 aaKnown RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 FGFR1OP2Q9NVK5 253 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 GDAP2Q9NXN4 497 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 XPO7Q9UIA9 1087 aaKnown RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SMIM28A0A1B0GU29 152 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 A8MXQ7 604 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 KCNE1P15382 129 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 TGM2P21980 687 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 AKAP5P24588 427 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SCNN1AP37088 669 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PSEN2P49810 448 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 WDR4P57081 412 aaKnown RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 OLFML2BQ68BL8 750 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SLC9A4Q6AI14 798 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 ARCQ7LC44 396 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 LIMS2Q7Z4I7 341 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 ANKRD52Q8NB46 1076 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 GDAP1Q8TB36 358 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 DENND1AQ8TEH3 1009 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 FAF2Q96CS3 445 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 RTP4Q96DX8 246 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SH3GL3Q99963 347 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 DHRS4Q9BTZ2 278 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 C11orf84Q9BUA3 381 aaPredicted RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SNRNP25Q9BV90 132 aaKnown RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 TRABDQ9H4I3 376 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 CYLDQ9NQC7 956 aa16.97■□□□□ 0.31
OTUB1-204ENST00000447683 PSMC3IPQ9P2W1 217 aaPredicted RBP16.97■□□□□ 0.31
OTUB1-204ENST00000447683 SSTR1P30872 391 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 PTPN9P43378 593 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 HDAC4P56524 1084 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 GEMIN4P57678 1058 aaKnown RBP16.96■□□□□ 0.31
OTUB1-204ENST00000447683 RNASELQ05823 741 aaKnown RBP16.96■□□□□ 0.31
OTUB1-204ENST00000447683 BST2Q10589 180 aaKnown RBP16.96■□□□□ 0.31
OTUB1-204ENST00000447683 ZC3H12AQ5D1E8 599 aaKnown RBP16.96■□□□□ 0.31
OTUB1-204ENST00000447683 UBXN11Q5T124 520 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 NUGGCQ68CJ6 796 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 SCYL2Q6P3W7 929 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 CAPN12Q6ZSI9 719 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 ZC3H18Q86VM9 953 aaKnown RBP16.96■□□□□ 0.31
OTUB1-204ENST00000447683 PDIK1LQ8N165 341 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.96■□□□□ 0.31
OTUB1-204ENST00000447683 LPIN3Q9BQK8 851 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 ACSS3Q9H6R3 686 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 GPATCH2LQ9NWQ4 482 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 FLRT1Q9NZU1 646 aa16.96■□□□□ 0.31
OTUB1-204ENST00000447683 ASMTLO95671 621 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 FGFR1P11362 822 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 NRLP54845 237 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 BASP1P80723 227 aaKnown RBP16.96■□□□□ 0.3
OTUB1-204ENST00000447683 KCNJ11Q14654 390 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 SLC26A9Q7LBE3 791 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 FBXO36Q8NEA4 188 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 PCDH19Q8TAB3 1148 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 CENPIQ92674 756 aaPredicted RBP16.96■□□□□ 0.3
OTUB1-204ENST00000447683 ZNF560Q96MR9 790 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 ZNF670Q9BS34 389 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 APOL6Q9BWW8 343 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 ETAA1Q9NY74 926 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 CPA4Q9UI42 421 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 MCM8Q9UJA3 840 aa16.96■□□□□ 0.3
OTUB1-204ENST00000447683 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.3
OTUB1-204ENST00000447683 PIN4Q9Y237 131 aaKnown RBP16.96■□□□□ 0.3
OTUB1-204ENST00000447683 USP15Q9Y4E8 981 aaPredicted RBP16.96■□□□□ 0.3
OTUB1-204ENST00000447683 CFAP69A5D8W1 941 aa16.95■□□□□ 0.3
OTUB1-204ENST00000447683 KPNA7A9QM74 516 aa16.95■□□□□ 0.3
OTUB1-204ENST00000447683 H7C0C1 242 aa16.95■□□□□ 0.3
OTUB1-204ENST00000447683 APOL1O14791 398 aa16.95■□□□□ 0.3
OTUB1-204ENST00000447683 SPTLC1O15269 473 aa16.95■□□□□ 0.3
OTUB1-204ENST00000447683 XPOTO43592 962 aaKnown RBP16.95■□□□□ 0.3
OTUB1-204ENST00000447683 HCRTO43612 131 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms