RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 DSEQ9UL01 958 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 PLAGL2Q9UPG8 496 aa6.21□□□□□ -1.41
PROM1-201ENST00000447510 UTP11Q9Y3A2 253 aaKnown RBP6.21□□□□□ -1.41
PROM1-201ENST00000447510 LRRC37A2A6NM11 1700 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ATP8B3O60423 1300 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 A0A1W2PQC6 194 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 TTI1O43156 1089 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 SART1O43290 800 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 MED7O43513 233 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 C4BPAP04003 597 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 ACAT1P24752 427 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 SLC11A1P49279 550 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 AFF1P51825 1210 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 IFI35P80217 286 aaPredicted RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 SETDB1Q15047 1291 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ZRSR2Q15696 482 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 USP41Q3LFD5 358 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 KLHDC7AQ5VTJ3 777 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ELMSAN1Q6PJG2 1045 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 TRAF7Q6Q0C0 670 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 SPATA2LQ8IUW3 424 aaPredicted RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 CCNJLQ8IV13 435 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 DCP1BQ8IZD4 617 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 LRRC52Q8N7C0 313 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 PHOSPHO2Q8TCD6 241 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 MIPOL1Q8TD10 442 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 CNOT10Q9H9A5 744 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 GDF3Q9NR23 364 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 FAM49BQ9NUQ9 324 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 DDX43Q9NXZ2 648 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 NKX1-2Q9UD57 310 aaPredicted RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 SALL4Q9UJQ4 1053 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 RWDD3Q9Y3V2 267 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ZNF711Q9Y462 761 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 GTPBP10A4D1E9 387 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 PTGESO14684 152 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 CYP26A1O43174 497 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 CA3P07451 260 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 RFX1P22670 979 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ANXA13P27216 316 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 LHX1P48742 406 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 MARSP56192 900 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 LILRA4P59901 499 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 FUT10Q6P4F1 479 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ACOT1Q86TX2 421 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 TEX9Q8N6V9 391 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 RBBP8NLQ8NC74 664 aaPredicted RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 PPFIBP2Q8ND30 876 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 PLEKHO2Q8TD55 490 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 RSPH1Q8WYR4 309 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 HERVK_113Q902F9 699 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ZNF516Q92618 1163 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ERGIC2Q96RQ1 377 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 NDNQ99608 321 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 RAB17Q9H0T7 212 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 VCX3BQ9H321 246 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 VCX3AQ9NNX9 186 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 MRPL17Q9NRX2 175 aaKnown RBP6.21□□□□□ -1.42
PROM1-201ENST00000447510 PCMTD2Q9NV79 361 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ARHGAP20Q9P2F6 1191 aa6.21□□□□□ -1.42
PROM1-201ENST00000447510 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 ANKRD62A6NC57 917 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 PRRG1O14668 218 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 PPEF2O14830 753 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 OPHN1O60890 802 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 DDHD2O94830 711 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 SP100P23497 879 aaPredicted RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 TARSP26639 723 aaKnown RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 KLRC2P26717 231 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 GNA15P30679 374 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 SSTR3P32745 418 aaPredicted RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 HSPA9P38646 679 aaKnown RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 SNX16P57768 344 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 PSMC1P62191 440 aaKnown RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 FAM189BP81408 668 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 UAP1Q16222 522 aaPredicted RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 SGO2Q562F6 1265 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 CMTR2Q8IYT2 770 aaKnown RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 VPS52Q8N1B4 723 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 FBXO22Q8NEZ5 403 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 SEMA4DQ92854 862 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 RAB3IPQ96QF0 476 aaPredicted RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 FMO2Q99518 471 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 STK33Q9BYT3 514 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 NEUROG2Q9H2A3 272 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 SMYD3Q9H7B4 428 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 CYP3A43Q9HB55 503 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 LRRC4CQ9HCJ2 640 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 CISHQ9NSE2 258 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 DNAJC17Q9NVM6 304 aaKnown RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 ADAMTS1Q9UHI8 967 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 LNPEPQ9UIQ6 1025 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 USP15Q9Y4E8 981 aaPredicted RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 LOXHD1Q8IVV2 1947 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 ABLIM1O14639 778 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 SUPT3HO75486 399 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 CXCL14O95715 111 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 ASS1P00966 412 aaKnown RBP6.2□□□□□ -1.42
PROM1-201ENST00000447510 GALTP07902 379 aa6.2□□□□□ -1.42
PROM1-201ENST00000447510 FAM200BP0CF97 657 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms