RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RBP3P10745 1247 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 NPR3P17342 541 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 IBSPP21815 317 aaPredicted RBP18.22■□□□□ 0.51
SMC6-206ENST00000446852 DSC3Q14574 896 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 MORF4L2Q15014 288 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 PDK2Q15119 407 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 NOMO1Q15155 1222 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 TUBB8Q3ZCM7 444 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 CLEC20AQ6ZU45 233 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 RNF169Q8NCN4 708 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 MAK16Q9BXY0 300 aaKnown RBP18.22■□□□□ 0.51
SMC6-206ENST00000446852 FOXP3Q9BZS1 431 aa18.22■□□□□ 0.51
SMC6-206ENST00000446852 FRMPD3Q5JV73 1810 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 MCF2LO15068 1137 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 NRLP54845 237 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 ADCY1Q08828 1119 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 ITGA7Q13683 1181 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 TRIM71Q2Q1W2 868 aaKnown RBP18.21■□□□□ 0.51
SMC6-206ENST00000446852 TNFAIP8L3Q5GJ75 292 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 MAP3K21Q5TCX8 1036 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 PQLC3Q8N755 202 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
SMC6-206ENST00000446852 RSAD2Q8WXG1 361 aa18.21■□□□□ 0.51
SMC6-206ENST00000446852 PRCCQ92733 491 aaPredicted RBP18.21■□□□□ 0.51
SMC6-206ENST00000446852 FARP1Q9Y4F1 1045 aaPredicted RBP18.21■□□□□ 0.51
SMC6-206ENST00000446852 ZNF623O75123 536 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 FAM163BP0C2L3 166 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 RPL22P35268 128 aaKnown RBP18.21■□□□□ 0.5
SMC6-206ENST00000446852 TFDP2Q14188 446 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 UPP1Q16831 310 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 ANKRD20A8PQ5CZ79 823 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 MAP7D3Q8IWC1 876 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 PLD5Q8N7P1 536 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 FAM71DQ8N9W8 422 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 PCDH19Q8TAB3 1148 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 MAGEB5Q9BZ81 275 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 SRRDQ9UH36 339 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 SHOC2Q9UQ13 582 aa18.21■□□□□ 0.5
SMC6-206ENST00000446852 MAGEA4P43358 317 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 CTCFP49711 727 aaPredicted RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 FASTKD3Q14CZ7 662 aaKnown RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 MFSD5Q6N075 450 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 CROCCP2Q86T23 111 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 ZC3H18Q86VM9 953 aaKnown RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 P3H4Q92791 437 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 CAPNS2Q96L46 248 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 ROPN1BQ9BZX4 212 aaPredicted RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 ZMYND15Q9H091 742 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 ROPN1Q9HAT0 212 aaPredicted RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 SAYSD1Q9NPB0 183 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 DDX20Q9UHI6 824 aaKnown RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 AGTP01019 485 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 POMCP01189 267 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 DESP17661 470 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 NDUFV1P49821 464 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 RABGGTBP53611 331 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 GAD2Q05329 585 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 PTK7Q13308 1070 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 PPP6R3Q5H9R7 873 aaPredicted RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 ANKRD22Q5VYY1 191 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 C1orf228Q6PIY5 440 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 TMEM86AQ8N2M4 240 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.2■□□□□ 0.5
SMC6-206ENST00000446852 CPT1BQ92523 772 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 ADAM2Q99965 735 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 SYT15Q9BQS2 421 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 KRT82Q9NSB4 513 aa18.2■□□□□ 0.5
SMC6-206ENST00000446852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMC6-206ENST00000446852 A0A0U1RQF3 1178 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 RAB27AP51159 221 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 ACLYP53396 1101 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 EFHC1Q5JVL4 640 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 ERMARDQ5T6L9 678 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 SLC9A4Q6AI14 798 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 DSTYKQ6XUX3 929 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 TAB3Q8N5C8 712 aaPredicted RBP18.19■□□□□ 0.5
SMC6-206ENST00000446852 CCDC185Q8N715 623 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 BCAS4Q8TDM0 211 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 FAF2Q96CS3 445 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 NCAPGQ9BPX3 1015 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 ZNF670Q9BS34 389 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 MED10Q9BTT4 135 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 TMEM30AQ9NV96 361 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 NOD1Q9Y239 953 aa18.19■□□□□ 0.5
SMC6-206ENST00000446852 MYBPHLA2RUH7 354 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 I3L4J1 428 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 IVLP07476 585 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 L1CAMP32004 1257 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 MATKP42679 507 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 LHX1P48742 406 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 MAP3K7CLP57077 242 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 SLC8A3P57103 927 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 ROR1Q01973 937 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 DPYSL2Q16555 572 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 HP1BP3Q5SSJ5 553 aaPredicted RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 FAM182AQ5T1J6 154 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 OTUD1Q5VV17 481 aaPredicted RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 DEFB106AQ8N104 65 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms