RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 DUSP16Q9BY84 665 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 CSNK1G1Q9HCP0 422 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 PNPLA8Q9NP80 782 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 GTSE1Q9NYZ3 720 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 CHORDC1Q9UHD1 332 aaPredicted RBP11.71□□□□□ -0.53
HLA-F-221ENST00000444621 ARHGAP26Q9UNA1 814 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 OBSL1O75147 1896 aa11.71□□□□□ -0.53
HLA-F-221ENST00000444621 NCANO14594 1321 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 C2orf78A6NCI8 922 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 SHISA7A6NL88 538 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 NFATC1O95644 943 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 RALAP11233 206 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 CD19P15391 556 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 TCF3P15923 654 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 ACO1P21399 889 aaKnown RBP11.7□□□□□ -0.54
HLA-F-221ENST00000444621 PMLP29590 882 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 NRLP54845 237 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 SLC7A9P82251 487 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 LRMPQ12912 555 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 CSRP2Q16527 193 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 CT47A1Q5JQC4 288 aaPredicted RBP11.7□□□□□ -0.54
HLA-F-221ENST00000444621 N4BP2L1Q5TBK1 243 aaPredicted RBP11.7□□□□□ -0.54
HLA-F-221ENST00000444621 CLEC17AQ6ZS10 378 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 PAQR9Q6ZVX9 377 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 ARHGAP18Q8N392 663 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 PPM1KQ8N3J5 372 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 JAKMIP2Q96AA8 810 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 CDK5RAP1Q96SZ6 601 aaKnown RBP11.7□□□□□ -0.54
HLA-F-221ENST00000444621 SMOQ99835 787 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 UBXN6Q9BZV1 441 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 GCNT4Q9P109 453 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 TBC1D14Q9P2M4 693 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 HMGXB4Q9UGU5 601 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 CCL26Q9Y258 94 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 SH3BP1Q9Y3L3 701 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 PCDHB4Q9Y5E5 795 aa11.7□□□□□ -0.54
HLA-F-221ENST00000444621 ATRXP46100 2492 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 FAM208BQ5VWN6 2430 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 LEFTY2O00292 366 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 ARNTLO00327 626 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 ATG13O75143 517 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 TADA3O75528 432 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 TPM2P07951 284 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 VDRP11473 427 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 BMP6P22004 513 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 CTHP32929 405 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 ATP5C1P36542 298 aaKnown RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 MTIF2P46199 727 aaKnown RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 TUBP50607 506 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 CCR3P51677 355 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 CACNA2D1P54289 1103 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 MARSP56192 900 aaKnown RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 SIM2Q14190 667 aaPredicted RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 STILQ15468 1287 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 PREPLQ4J6C6 727 aaPredicted RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 SNX30Q5VWJ9 437 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 CLEC20AQ6ZU45 233 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 SCAMP5Q8TAC9 235 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 LRRC3BQ96PB8 259 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 TWNKQ96RR1 684 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 FAM83CQ9BQN1 747 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 CHRDQ9H2X0 955 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 IL37Q9NZH6 218 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 LSM7Q9UK45 103 aaKnown RBP11.69□□□□□ -0.54
HLA-F-221ENST00000444621 SCML2Q9UQR0 700 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 CPQQ9Y646 472 aa11.69□□□□□ -0.54
HLA-F-221ENST00000444621 ANAPC1Q9H1A4 1944 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 TNFRSF10BO14763 440 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 OAS1P00973 400 aaKnown RBP11.68□□□□□ -0.54
HLA-F-221ENST00000444621 PAEPP09466 180 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 DRD1P21728 446 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 SOX9P48436 509 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 BCAT1P54687 386 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 RAD23BP54727 409 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 SHC2P98077 582 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 TNK2Q07912 1038 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 PON2Q15165 354 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 ZNF77Q15935 545 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 ARHGAP17Q68EM7 881 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 IL31Q6EBC2 164 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 NUDT18Q6ZVK8 323 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 ENOSF1Q7L5Y1 443 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 TRIM59Q8IWR1 403 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 ZNF687Q8N1G0 1237 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 ANKRD52Q8NB46 1076 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 SLC4A11Q8NBS3 891 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 WHAMMQ8TF30 809 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 OTUB2Q96DC9 234 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 CNOT6LQ96LI5 555 aaKnown RBP11.68□□□□□ -0.54
HLA-F-221ENST00000444621 SLC22A12Q96S37 553 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 ECT2Q9H8V3 914 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 LRRC4Q9HBW1 653 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 SMPD4Q9NXE4 827 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 GMIPQ9P107 970 aa11.68□□□□□ -0.54
HLA-F-221ENST00000444621 CFAP97Q9P2B7 532 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms