RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.33
USP1-203ENST00000442679 NAGPAQ9UK23 515 aa12.96□□□□□ -0.33
USP1-203ENST00000442679 DUSP12Q9UNI6 340 aa12.96□□□□□ -0.33
USP1-203ENST00000442679 CEP83Q9Y592 693 aa12.96□□□□□ -0.33
USP1-203ENST00000442679 MUC3AQ02505 3323 aa12.96□□□□□ -0.34
USP1-203ENST00000442679 TTC28Q96AY4 2481 aa12.96□□□□□ -0.34
USP1-203ENST00000442679 COCHO43405 550 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 FBXO21O94952 628 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 OLFM2O95897 454 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 TBX18O95935 607 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 MMEP08473 750 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 MBL2P11226 248 aaPredicted RBP12.95□□□□□ -0.34
USP1-203ENST00000442679 RALAP11233 206 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 SRFP11831 508 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 GDI1P31150 447 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 RPL34P49207 117 aaKnown RBP12.95□□□□□ -0.34
USP1-203ENST00000442679 TUBP50607 506 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 DAOAP59103 153 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 YWHAGP61981 247 aaKnown RBP eCLIP12.95□□□□□ -0.34
USP1-203ENST00000442679 SLC7A9P82251 487 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 PDCLQ13371 301 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 TMEM110Q86TL2 294 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 ZNF677Q86XU0 584 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 SCML4Q8N228 414 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 EPS8L1Q8TE68 723 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 SH3RF2Q8TEC5 729 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 SLC20A1Q8WUM9 679 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 DEPDC1BQ8WUY9 529 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 BAP1Q92560 729 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 NOX5Q96PH1 765 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 MIS12Q9H081 205 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 KIF9Q9HAQ2 790 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 SLC2A4RGQ9NR83 387 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.95□□□□□ -0.34
USP1-203ENST00000442679 THG1LQ9NWX6 298 aaKnown RBP12.95□□□□□ -0.34
USP1-203ENST00000442679 CLIC5Q9NZA1 410 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 NOCTQ9UK39 431 aaKnown RBP12.95□□□□□ -0.34
USP1-203ENST00000442679 MYO6Q9UM54 1294 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 ARHGAP26Q9UNA1 814 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 CPQQ9Y646 472 aa12.95□□□□□ -0.34
USP1-203ENST00000442679 LRRC53A6NM62 1247 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 YJEFN3A6XGL0 299 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 E7ENQ6 273 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 ZNF263O14978 683 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 CCDC172P0C7W6 258 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 FERP16591 822 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 CHRNB2P17787 502 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 ATP5C1P36542 298 aaKnown RBP12.94□□□□□ -0.34
USP1-203ENST00000442679 CDR2Q01850 454 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 FCHO2Q0JRZ9 810 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 FIGNQ5HY92 759 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 BSPRYQ5W0U4 402 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 BHLHA9Q7RTU4 235 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 TADA2BQ86TJ2 420 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 FMNL3Q8IVF7 1028 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 TMEM35BQ8NCS4 154 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 C1orf131Q8NDD1 294 aaKnown RBP12.94□□□□□ -0.34
USP1-203ENST00000442679 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 IRGQQ8WZA9 623 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 CDK5RAP1Q96SZ6 601 aaKnown RBP12.94□□□□□ -0.34
USP1-203ENST00000442679 TTYH3Q9C0H2 523 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 BRD9Q9H8M2 597 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 SMPD4Q9NXE4 827 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 NUDT5Q9UKK9 219 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
USP1-203ENST00000442679 DOCK8Q8NF50 2099 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 E5RJQ4 531 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 LEFTY2O00292 366 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 CHADO15335 359 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 LSM8O95777 96 aaKnown RBP12.93□□□□□ -0.34
USP1-203ENST00000442679 SNX16P57768 344 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 ZXDBP98169 803 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 PFKPQ01813 784 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 SIGLEC14Q08ET2 396 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 ZNF77Q15935 545 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 SFMBT2Q5VUG0 894 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 CC2D1AQ6P1N0 951 aaPredicted RBP12.93□□□□□ -0.34
USP1-203ENST00000442679 KLHDC10Q6PID8 442 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 TRIM67Q6ZTA4 783 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 RSRC2Q7L4I2 434 aaKnown RBP12.93□□□□□ -0.34
USP1-203ENST00000442679 IRF2BP2Q7Z5L9 587 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 ZNF397Q8NF99 534 aaPredicted RBP12.93□□□□□ -0.34
USP1-203ENST00000442679 RIN3Q8TB24 985 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 CPLX3Q8WVH0 158 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 GOLGA1Q92805 767 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 IRF7Q92985 503 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
USP1-203ENST00000442679 CPXM1Q96SM3 734 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms