RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 ANLNQ9NQW6 1124 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 TBC1D13Q9NVG8 400 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 DMGDHQ9UI17 866 aaKnown RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 AFDNP55196 1824 aaKnown RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 SPEF2Q9C093 1822 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 CARNS1A5YM72 827 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 MANSC4A6NHS7 340 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 PFDN1O60925 122 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 MPOP05164 745 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 GLI1P08151 1106 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 SEC24CP53992 1094 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 CCDC15Q0P6D6 951 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 PPIL2Q13356 520 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ZNF177Q13360 481 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ARHGEF7Q14155 803 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 SEZ6Q53EL9 994 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 TATDN1Q6P1N9 297 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ANKS3Q6ZW76 656 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 USP50Q70EL3 339 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 FAM9CQ8IZT9 166 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 LZTR1Q8N653 840 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ARRDC4Q8NCT1 418 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 EPS8L3Q8TE67 593 aaKnown RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ATG4AQ8WYN0 398 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 TNFRSF25Q93038 417 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 SH3KBP1Q96B97 665 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 ABHD16BQ9H3Z7 469 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 CCDC134Q9H6E4 229 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 TRPC7Q9HCX4 862 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 TRHDEQ9UKU6 1024 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 PKP3Q9Y446 797 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 COL4A1P02462 1669 aa6.62□□□□□ -1.35
CNOT1-202ENST00000441024 C2orf81A6NN90 581 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 C16orf96A6NNT2 1141 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 F5H5T6 163 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 THPOP40225 353 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 NPY2RP49146 381 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 FUT2Q10981 343 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 ITGA9Q13797 1035 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 TTLL9Q3SXZ7 439 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 MIIPQ5JXC2 388 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 KCNK18Q7Z418 384 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 LRP10Q7Z4F1 713 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 LCA5Q86VQ0 697 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 UNC93AQ86WB7 457 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 OR9Q1Q8NGQ5 310 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CYP2W1Q8TAV3 490 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 PGM2Q96G03 612 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 PAFAH2Q99487 392 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 GANQ9H2C0 597 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CASS4Q9NQ75 786 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CD274Q9NZQ7 290 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 KIF17Q9P2E2 1029 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 SLC39A10Q9ULF5 831 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 RPS6KL1Q9Y6S9 549 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 SUPT3HB4E1H0 165 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 RIPK2O43353 540 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CLASP2O75122 1294 aaKnown RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 RHOBTB1O94844 696 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 VTNP04004 478 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 RBP1P09455 135 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 THRAP10827 490 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 PTPRAP18433 802 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 MGAT5Q09328 741 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 MED21Q13503 144 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 MROH9Q5TGP6 573 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 PTRHD1Q6GMV3 140 aaKnown RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 PRPF39Q86UA1 669 aaKnown RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CREG2Q8IUH2 290 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 SLC25A41Q8N5S1 370 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 ARMC2Q8NEN0 867 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 OSBPL1AQ9BXW6 950 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 SLC40A1Q9NP59 571 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 PKD2L2Q9NZM6 624 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 STX18Q9P2W9 335 aaKnown RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CHORDC1Q9UHD1 332 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 SYCE1LA8MT33 242 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 VGLL3A8MV65 326 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 KDM1AO60341 852 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CAND2O75155 1236 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 ERBB2P04626 1255 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 HMBSP08397 361 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CXCL8P10145 99 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 ACO1P21399 889 aaKnown RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CYP2F1P24903 491 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 DENND5BQ6ZUT9 1274 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 TMC3Q7Z5M5 1100 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 TMEM86AQ8N2M4 240 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 SOCS4Q8WXH5 440 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 SEPT8Q92599 483 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 LRRC39Q96DD0 335 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CPB2Q96IY4 423 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CEP19Q96LK0 163 aa6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CHCHD3Q9NX63 227 aaKnown RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-202ENST00000441024 KLK14Q9P0G3 267 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms