RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 TMEM92Q6UXU6 159 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 ALLCQ8N6M5 410 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 IL17RCQ8NAC3 791 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 TXNDC5Q8NBS9 432 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 SPRYD3Q8NCJ5 442 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 SLC2A14Q8TDB8 520 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 SMOQ99835 787 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 CSNK1G1Q9HCP0 422 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 POLMQ9NP87 494 aaPredicted RBP12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 SPHK2Q9NRA0 654 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 GMIPQ9P107 970 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 EML5Q05BV3 1969 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 CEP295Q9C0D2 2601 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 TBC1D3BA6NDS4 549 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 SGK1O00141 431 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 MAPK13O15264 365 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 HOXC11O43248 304 aaPredicted RBP12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 CALUO43852 315 aaPredicted RBP12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 TLR5O60602 858 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 HLA-DRAP01903 254 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 CCDC130P13994 396 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 KIR2DL1P43626 348 aaPredicted RBP12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 MAP3K7CLP57077 242 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 KDSRQ06136 332 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 TCEAL6Q6IPX3 200 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 NUDT18Q6ZVK8 323 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 C12orf40Q86WS4 652 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 SFTPA1Q8IWL2 248 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 C12orf29Q8N999 325 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 ZMIZ2Q8NF64 920 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 MDGA1Q8NFP4 955 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 OLIG1Q8TAK6 271 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 KCNV2Q8TDN2 545 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 CCDC47Q96A33 483 aaKnown RBP12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 NACA2Q9H009 215 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 TLR8Q9NR97 1041 aaKnown RBP12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 DEC1Q9P2X7 70 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 TRAF3IP3Q9Y228 551 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 HPSEQ9Y251 543 aa12.3□□□□□ -0.44
UBE2D4-204ENST00000440899 ABCA7Q8IZY2 2146 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 KMT2BQ9UMN6 2715 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 BEST1O76090 585 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 FAM200BP0CF97 657 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 HNRNPLP14866 589 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 P2RY2P41231 377 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 PIK3CAP42336 1068 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 ASPAP45381 313 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 VAMP7P51809 220 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 INCA1Q0VD86 236 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 ORC1Q13415 861 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 BYSLQ13895 437 aaKnown RBP12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 NFIL3Q16649 462 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 C1orf220Q5T0J3 134 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 N4BP2L1Q5TBK1 243 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 HTR3DQ70Z44 454 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 TRMT11Q7Z4G4 463 aaKnown RBP12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 TMEM25Q86YD3 366 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 BBS7Q8IWZ6 715 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 ETFBKMTQ8IXQ9 262 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 PHTF2Q8N3S3 785 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 NAT16Q8N8M0 369 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 HNRNPABQ99729 332 aaKnown RBP12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 EDEM2Q9BV94 578 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 IMPG2Q9BZV3 1241 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 FAM49BQ9NUQ9 324 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 HMGXB4Q9UGU5 601 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 SCML2Q9UQR0 700 aa12.29□□□□□ -0.44
UBE2D4-204ENST00000440899 FAM237AA0A1B0GTK4 181 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 C4orf47A7E2U8 309 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 KHNYNO15037 678 aaKnown RBP12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 MAP3K13O43283 966 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 ADAM23O75077 832 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 TULP3O75386 442 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 RHOBTB3O94955 611 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 KCNK5O95279 499 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 IRF1P10914 325 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 KRT13P13646 458 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 BCKDHBP21953 392 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 NR2F2P24468 414 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 ADORA2BP29275 332 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 ATP5C1P36542 298 aaKnown RBP12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 SYKP43405 635 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 DHPSP49366 369 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 PGFP49763 221 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 KRT85P78386 507 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 ENPEPQ07075 957 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 GOLGA8FQ08AF8 430 aa12.28□□□□□ -0.44
UBE2D4-204ENST00000440899 GOLGA8DPQ0D2H9 430 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms