RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 UROC1Q96N76 676 aa13.77□□□□□ -0.2
ACTN4-204ENST00000440400 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.2
ACTN4-204ENST00000440400 PABPC3Q9H361 631 aaKnown RBP13.77□□□□□ -0.2
ACTN4-204ENST00000440400 GOLGA2P5Q9HBQ8 144 aa13.77□□□□□ -0.2
ACTN4-204ENST00000440400 PADI3Q9ULW8 664 aa13.77□□□□□ -0.2
ACTN4-204ENST00000440400 PLAAQ9Y263 795 aa13.77□□□□□ -0.2
ACTN4-204ENST00000440400 A8MXQ7 604 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 RARGP13631 454 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 ELNP15502 786 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 TKTP29401 623 aaKnown RBP13.77□□□□□ -0.21
ACTN4-204ENST00000440400 KCNJ1P48048 391 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 FAM189BP81408 668 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 SLMAPQ14BN4 828 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 KIAA0319Q5VV43 1072 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 HIBCHQ6NVY1 386 aaPredicted RBP13.77□□□□□ -0.21
ACTN4-204ENST00000440400 RXFP2Q8WXD0 754 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 ATG4AQ8WYN0 398 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 APOL6Q9BWW8 343 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 DUSP16Q9BY84 665 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 SAGE1Q9NXZ1 904 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 USP18Q9UMW8 372 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 M0QZQ0 153 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 NDC80O14777 642 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 HUS1O60921 280 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 GAS8O95995 478 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 RAB41Q5JT25 222 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 BZW1Q7L1Q6 419 aaKnown RBP13.77□□□□□ -0.21
ACTN4-204ENST00000440400 RNF180Q86T96 592 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 SPATS2Q86XZ4 545 aaKnown RBP13.77□□□□□ -0.21
ACTN4-204ENST00000440400 TTC13Q8NBP0 860 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 OR6B3Q8NGW1 331 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 SNX25Q9H3E2 840 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 PHF24Q9UPV7 400 aa13.77□□□□□ -0.21
ACTN4-204ENST00000440400 THP07101 528 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 MLH1P40692 756 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 PMS2P54278 862 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 PDK2Q15119 407 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 YTHDF3Q7Z739 585 aaKnown RBP13.76□□□□□ -0.21
ACTN4-204ENST00000440400 CCDC50Q8IVM0 306 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 EMC1Q8N766 993 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
ACTN4-204ENST00000440400 ZFP42Q96MM3 310 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 DDX23Q9BUQ8 820 aaKnown RBP13.76□□□□□ -0.21
ACTN4-204ENST00000440400 HESX1Q9UBX0 185 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 RPS6KL1Q9Y6S9 549 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 DNAH12Q6ZR08 3092 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 HMGB1P1B2RPK0 211 aaPredicted RBP13.76□□□□□ -0.21
ACTN4-204ENST00000440400 HCRTO43612 131 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 PECAM1P16284 738 aaPredicted RBP13.76□□□□□ -0.21
ACTN4-204ENST00000440400 LHX1P48742 406 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 ADCY1Q08828 1119 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 TRMT10CQ7L0Y3 403 aaKnown RBP13.76□□□□□ -0.21
ACTN4-204ENST00000440400 SLAIN1Q8ND83 568 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 ADAM7Q9H2U9 754 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
ACTN4-204ENST00000440400 ATXN2Q99700 1313 aaKnown RBP13.76□□□□□ -0.21
ACTN4-204ENST00000440400 CCDC130P13994 396 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 DHX9Q08211 1270 aaKnown RBP13.75□□□□□ -0.21
ACTN4-204ENST00000440400 BYSLQ13895 437 aaKnown RBP13.75□□□□□ -0.21
ACTN4-204ENST00000440400 CCDC89Q8N998 374 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 CD99L2Q8TCZ2 262 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 SLC2A13Q96QE2 648 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 RSAD1Q9HA92 442 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 NOD2Q9HC29 1040 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 CSNK1G1Q9HCP0 422 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 MTRF1LQ9UGC7 380 aaKnown RBP13.75□□□□□ -0.21
ACTN4-204ENST00000440400 CYB561D2O14569 222 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 TCEA3O75764 348 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
ACTN4-204ENST00000440400 SLC8A1P32418 973 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 THPOP40225 353 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 APLP1P51693 650 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 DPYSL3Q14195 570 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 SLC9A4Q6AI14 798 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 KDM7AQ6ZMT4 941 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 PSTKQ8IV42 348 aaKnown RBP13.75□□□□□ -0.21
ACTN4-204ENST00000440400 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 TLCD1Q96CP7 247 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 RTP4Q96DX8 246 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 ATP6V1G3Q96LB4 118 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 RTP3Q9BQQ7 232 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 FAM167BQ9BTA0 163 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 HEMGNQ9BXL5 484 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 DNPEPQ9ULA0 475 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 TMEM189-UBE2V1I3L0A0 370 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 APOC4-APOC2K7ER74 178 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 DAB1O75553 588 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 APOC2P02655 101 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 KRT10P13645 584 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 IL4RP24394 825 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 CD52P31358 61 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 BOLA3Q53S33 107 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-204ENST00000440400 OR6B2Q6IFH4 312 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 FAM171BQ6P995 826 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 STRADAQ7RTN6 431 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 PGBD4Q96DM1 585 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms