RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 B3GNTL1Q67FW5 361 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 SP5Q6BEB4 398 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 GADL1Q6ZQY3 521 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC129Q6ZRS4 1044 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 CLNKQ7Z7G1 428 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 RHOT1Q8IXI2 618 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 NECAB1Q8N987 351 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 FBXO18Q8NFZ0 1043 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 TRIM44Q96DX7 344 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 LRGUKQ96M69 825 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 TAAR9Q96RI9 348 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 STRBPQ96SI9 672 aaKnown RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 SEC62Q99442 399 aaKnown RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 NEU1Q99519 415 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZSWIM1Q9BR11 485 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 AIFM2Q9BRQ8 373 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 TSPY26PQ9H489 355 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 RSAD1Q9HA92 442 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 NMRK2Q9NPI5 230 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 GNL3LQ9NVN8 582 aaKnown RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 KCTD5Q9NXV2 234 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 SLC17A6Q9P2U8 582 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 USP25Q9UHP3 1055 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 TRMT112Q9UI30 125 aaKnown RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 CTNNA3Q9UI47 895 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 MTMR6Q9Y217 621 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 RUVBL1Q9Y265 456 aaKnown RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 CNPY2Q9Y2B0 182 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 DISP2A7MBM2 1401 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZNF609O15014 1411 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 FRMPD2Q68DX3 1309 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 PNPLA7Q6ZV29 1317 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 VPS37CA5D8V6 355 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 CDHR4A6H8M9 788 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 KLHL33A6NCF5 533 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 A6NNZ2 444 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 BCL9O00512 1426 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 XPOTO43592 962 aaKnown RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 PFKFB2O60825 505 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZFYP08048 801 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 CYP21A2P08686 494 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 HSPD1P10809 573 aaKnown RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 VCAM1P19320 739 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 PAX3P23760 479 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 GPTP24298 496 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 SERPINB3P29508 390 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ADORA1P30542 326 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 C21orf58P58505 322 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZNF280AP59817 542 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 UBE2HP62256 183 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ST3GAL1Q11201 340 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 STK3Q13188 491 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 PICALMQ13492 652 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ACAP2Q15057 778 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 SAFBQ15424 915 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 PREPLQ4J6C6 727 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 PABPC1LQ4VXU2 614 aaKnown RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ARHGAP29Q52LW3 1261 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 COBLL1Q53SF7 1204 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC183Q5T5S1 534 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZSCAN25Q6NSZ9 544 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 FBXO42Q6P3S6 717 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 LDHAL6AQ6ZMR3 332 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 CHST15Q7LFX5 561 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 C11orf96Q7Z7L8 435 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 GPR149Q86SP6 731 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZNF34Q8IZ26 560 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 LNX2Q8N448 690 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 BOLLQ8N9W6 283 aaKnown RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 SIMC1Q8NDZ2 872 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 SLC35G2Q8TBE7 412 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 TBC1D15Q8TC07 691 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 STON2Q8WXE9 905 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 JADE3Q92613 823 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 GTF3C6Q969F1 213 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 TCEANC2Q96MN5 208 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 BBC3Q96PG8 261 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 LLPHQ9BRT6 129 aaKnown RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 SYNPO2LQ9H987 977 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 PTPRHQ9HD43 1115 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 RRAGDQ9NQL2 400 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 CNNM1Q9NRU3 951 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 SIK3Q9Y2K2 1263 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 UBR2Q8IWV8 1755 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ARFGEF2Q9Y6D5 1785 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 PAPPAQ13219 1627 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 NHSL1Q5SYE7 1610 aa3.91□□□□□ -1.78
HMGB3P11-201ENST00000440127 ABCC12Q96J65 1359 aa3.9□□□□□ -1.78
HMGB3P11-201ENST00000440127 COL14A1Q05707 1796 aaKnown RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 A0A1W2PS29 197 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 CCDC189A1A4V9 331 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 E7EWF7 191 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 FIBPO43427 364 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 DTNBO60941 627 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 PDE8BO95263 885 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 UQCRFS1P1P0C7P4 283 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 HSPA6P17066 643 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 FPR1P21462 350 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 AKAP5P24588 427 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 PCSK1P29120 753 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms