RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DPYSL2Q16555 572 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 MDH1BQ5I0G3 518 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 C6orf118Q5T5N4 469 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 RNASEH2BQ5TBB1 312 aaKnown RBP12.29□□□□□ -0.44
SMAD3-202ENST00000439724 KIAA0319Q5VV43 1072 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 SLC9A4Q6AI14 798 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 SCYL2Q6P3W7 929 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 DSTYKQ6XUX3 929 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 CLEC20AQ6ZU45 233 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 PCGF5Q86SE9 256 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-202ENST00000439724 GLT1D1Q96MS3 346 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 ADAM2Q99965 735 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 NINJ2Q9NZG7 142 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 SAE1Q9UBE0 346 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-202ENST00000439724 CDH9Q9ULB4 789 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 NOVA2Q9UNW9 492 aaKnown RBP12.29□□□□□ -0.44
SMAD3-202ENST00000439724 PTCH2Q9Y6C5 1203 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 ERICH4A6NGS2 130 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 CASTOR2A6NHX0 329 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 SMAPO00193 183 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 CLDN5O00501 218 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 APOL1O14791 398 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 RASGRF2O14827 1237 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 EIF3HO15372 352 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 TCEA3O75764 348 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 CYP11A1P05108 521 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ABHD2P08910 425 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 FAM200BP0CF97 657 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 RBP3P10745 1247 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ODC1P11926 461 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 TFE3P19532 575 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 IL4RP24394 825 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 PCSK1P29120 753 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 PPP2R2AP63151 447 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 MRPS5P82675 430 aaKnown RBP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 TUSC3Q13454 348 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 TIGD5Q53EQ6 642 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ANKRD20A8PQ5CZ79 823 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ZC3H12AQ5D1E8 599 aaKnown RBP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 TNFAIP8L3Q5GJ75 292 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ERMARDQ5T6L9 678 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ZNF598Q86UK7 904 aaKnown RBP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 ECHDC2Q86YB7 292 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 PQLC3Q8N755 202 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 RAET1EQ8TD07 263 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 RSAD2Q8WXG1 361 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 PRCCQ92733 491 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 P3H4Q92791 437 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 UROC1Q96N76 676 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 MED10Q9BTT4 135 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 LRRC4Q9HBW1 653 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 KRT82Q9NSB4 513 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 GPATCH2LQ9NWQ4 482 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 BCCIPQ9P287 314 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 SLC12A6Q9UHW9 1150 aa12.28□□□□□ -0.44
SMAD3-202ENST00000439724 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-202ENST00000439724 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 SRRM3A6NNA2 597 aaPredicted RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 RGS16O15492 202 aaPredicted RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 TRPA1O75762 1119 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 BEST1O76090 585 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 FBXO21O94952 628 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 ACSL3O95573 720 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 AGTP01019 485 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 IFNB1P01574 187 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 STIP1P31948 543 aaKnown RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 RDXP35241 583 aaKnown RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 RPL22P35268 128 aaKnown RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 MDH1P40925 334 aaKnown RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 GDF10P55107 478 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 MAGOHP61326 146 aaKnown RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 ROR1Q01973 937 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 CA9Q16790 459 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 SLC25A52Q3SY17 297 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 TRAF7Q6Q0C0 670 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 LRRC31Q6UY01 552 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 BNIPLQ7Z465 357 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 PSTKQ8IV42 348 aaKnown RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 DEFB106AQ8N104 65 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 PLD5Q8N7P1 536 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 SLC43A3Q8NBI5 491 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 PCDH19Q8TAB3 1148 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 MYCBPAPQ8TBZ2 947 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 EPS8L3Q8TE67 593 aaKnown RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 NT5C3BQ969T7 300 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 PWWP2AQ96N64 755 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 TTC25Q96NG3 672 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 SERPINB12Q96P63 405 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 SLC2A13Q96QE2 648 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 RBM15Q96T37 977 aaKnown RBP eCLIP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.44
SMAD3-202ENST00000439724 STMN4Q9H169 189 aaPredicted RBP12.27□□□□□ -0.44
SMAD3-202ENST00000439724 DSEQ9UL01 958 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms