RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 ZFYVE19Q96K21 471 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ZBTB45Q96K62 511 aaPredicted RBP4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 VN1R3Q9BXE9 311 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TRIM5Q9C035 493 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 HIPK2Q9H2X6 1198 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SMURF2Q9HAU4 748 aa4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 GAR1Q9NY12 217 aaKnown RBP4.81□□□□□ -1.64
UPP2-IT1-201ENST00000439185 FAM90A8PA6NJQ4 464 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 B4DGG1 531 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TMPRSS11DO60235 418 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TULP3O75386 442 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 UBXN7O94888 489 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 RASAL1O95294 804 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TOMM40O96008 361 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CT47B1P0C2W7 299 aaPredicted RBP4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 FAM90A13PP0C7W8 464 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 FAM90A24PP0C7X0 464 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 NEK2P51955 445 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 YPEL5P62699 121 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 NPY5RQ15761 445 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CC2D1BQ5T0F9 858 aaKnown RBP4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CACHD1Q5VU97 1274 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 KCTD20Q7Z5Y7 419 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 PPP1R35Q8TAP8 253 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 HOOK2Q96ED9 719 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 FAM234AQ9H0X4 552 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ZMAT3Q9HA38 289 aaKnown RBP4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 XPNPEP3Q9NQH7 507 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 GABBR1Q9UBS5 961 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 MAFFQ9ULX9 164 aa4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.8□□□□□ -1.64
UPP2-IT1-201ENST00000439185 H3BML4 177 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CLIC1O00299 241 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SMAD6O43541 496 aaKnown RBP4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 IBSPP21815 317 aaPredicted RBP4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CFHR3Q02985 330 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 STIM1Q13586 685 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SLC9C1Q4G0N8 1177 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 WDYHV1Q96HA8 205 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 GPATCH3Q96I76 525 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ZNF518BQ9C0D4 1074 aa4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 A1CFQ9NQ94 594 aaKnown RBP4.79□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CD3EAPO15446 510 aaKnown RBP4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CPA2P48052 419 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 SLC14A1Q13336 389 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 MTX1Q13505 466 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 MFSD13AQ14CX5 517 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 INSCQ1MX18 579 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 ZNF549Q6P9A3 640 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 UBE2Q1Q7Z7E8 422 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 OR56A3Q8NH54 315 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 IGFBPL1Q8WX77 278 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 THOC3Q96J01 351 aaKnown RBP4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 CAMK1GQ96NX5 476 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 PPP1R9BQ96SB3 815 aa4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 DNMT3BQ9UBC3 853 aaKnown RBP4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 NOP58Q9Y2X3 529 aaKnown RBP4.78□□□□□ -1.64
UPP2-IT1-201ENST00000439185 NOTCH4Q99466 2003 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 EXOC5O00471 708 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 HGFP14210 728 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 EN2P19622 333 aaPredicted RBP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 MCM5P33992 734 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 CDKN2AP42771 156 aaKnown RBP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 ITGA8P53708 1063 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 HSF1Q00613 529 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 TIAL1Q01085 375 aaKnown RBP eCLIP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 ZNF750Q32MQ0 723 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 DAB2IPQ5VWQ8 1189 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 LVRNQ6Q4G3 990 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 DLK2Q6UY11 383 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 COL23A1Q86Y22 540 aaPredicted RBP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 MMP21Q8N119 569 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 C12orf76Q8N812 135 aaPredicted RBP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 MAML1Q92585 1016 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 EDC3Q96F86 508 aaKnown RBP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 LRGUKQ96M69 825 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 ACO2Q99798 780 aaKnown RBP4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 TRIM36Q9NQ86 728 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 ASAP1Q9ULH1 1129 aa4.77□□□□□ -1.65
UPP2-IT1-201ENST00000439185 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 H7C4K7 107 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 GTPBP1O00178 669 aaKnown RBP4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 PHGDHO43175 533 aaKnown RBP4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 HSPA6P17066 643 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 TACR3P29371 465 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 SLC7A1P30825 629 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 GATMP50440 423 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 DEUP1Q05D60 604 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 PFKFB3Q16875 520 aaPredicted RBP4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 UBAP2Q5T6F2 1119 aaKnown RBP4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 B3GNT9Q6UX72 402 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 PELI3Q8N2H9 469 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 NGDNQ8NEJ9 315 aaKnown RBP4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 IL31RAQ8NI17 732 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 MLXIPQ9HAP2 919 aa4.76□□□□□ -1.65
UPP2-IT1-201ENST00000439185 ATP6V0A4Q9HBG4 840 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms