RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 LIMS2Q7Z4I7 341 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 KBTBD6Q86V97 674 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 C12orf50Q8NA57 414 aaPredicted RBP9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 XXYLT1Q8NBI6 393 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 RPLP0P6Q8NHW5 317 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 GAB3Q8WWW8 586 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 CD101Q93033 1021 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 SPATA17Q96L03 361 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 HHIPQ96QV1 700 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 MRPL45Q9BRJ2 306 aaKnown RBP9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 SRRTQ9BXP5 876 aaKnown RBP9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 ARRDC1-AS1Q9H2J1 176 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 LINC00597Q9H2U6 94 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 GRPEL1Q9HAV7 217 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 AGPAT3Q9NRZ7 376 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 GCNT4Q9P109 453 aa9.78□□□□□ -0.84
AC011228.1-201ENST00000439027 F8VP50 259 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 TRIM66O15016 1216 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 CALUO43852 315 aaPredicted RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 GDF9O60383 454 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 FOXD2O60548 495 aaPredicted RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 NFATC1O95644 943 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 PTPN1P18031 435 aaKnown RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 PDE6CP51160 858 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 USP46P62068 366 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 CYP24A1Q07973 514 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 IFRD2Q12894 506 aaPredicted RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 USP4Q13107 963 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 ADAM9Q13443 819 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 PSMD6Q15008 389 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 SF3A2Q15428 464 aaKnown RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 EML3Q32P44 896 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 WDR72Q3MJ13 1102 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 PPM1JQ5JR12 505 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 IL31Q6EBC2 164 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 MYCBPAPQ8TBZ2 947 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 EEF2KMTQ96G04 330 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 PCED1BQ96HM7 432 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 CGRRF1Q99675 332 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 HSD3B7Q9H2F3 369 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 SAMSN1Q9NSI8 373 aaKnown RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 SMPD4Q9NXE4 827 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 EHD2Q9NZN4 543 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 NXF1Q9UBU9 619 aaKnown RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 TSR3Q9UJK0 312 aaKnown RBP9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 ARHGAP26Q9UNA1 814 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 TRAF3IP3Q9Y228 551 aa9.77□□□□□ -0.85
AC011228.1-201ENST00000439027 CCDC163A0A0D9SF12 145 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 ZNF840PA6NDX5 716 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 A8MXQ7 604 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 LEFTY2O00292 366 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 SCAMP3O14828 347 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CETN3O15182 167 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 EXOC3O60645 756 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 TACC1O75410 805 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 FGFR1OPO95684 399 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 APBB3O95704 486 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 NR3C1P04150 777 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 RPL13P26373 211 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 SEC13P55735 322 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 MYL6P60660 151 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 SNRPFP62306 86 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 FKBP3Q00688 224 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 TAF10Q12962 218 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 BIRC3Q13489 604 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 DMC1Q14565 340 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 EDRF1Q3B7T1 1238 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 C2orf27AQ580R0 203 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CDKAL1Q5VV42 579 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 TDRD10Q5VZ19 366 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 FOXR2Q6PJQ5 311 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 TTC30AQ86WT1 665 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 IRF2BP1Q8IU81 584 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CREBRFQ8IUR6 639 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CAMKK1Q8N5S9 505 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CCDC26Q8TAB7 109 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 GOLGA5Q8TBA6 731 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 ACDQ96AP0 544 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 LOXL4Q96JB6 756 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 C8orf48Q96LL4 319 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CEP295NLQ96MC4 621 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CNTNAP3BQ96NU0 1288 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 MED10Q9BTT4 135 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CNTNAP3Q9BZ76 1288 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 ZNF518BQ9C0D4 1074 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 DPEP3Q9H4B8 488 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 ABCA7Q8IZY2 2146 aa9.76□□□□□ -0.85
AC011228.1-201ENST00000439027 CLDN5O00501 218 aa9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 DCLK1O15075 740 aa9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 AKAP3O75969 853 aa9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 EPN2O95208 641 aa9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 FAM163BP0C2L3 166 aa9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 MBL2P11226 248 aaPredicted RBP9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 ATP1A3P13637 1013 aa9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 ZNF18P17022 549 aa9.75□□□□□ -0.85
AC011228.1-201ENST00000439027 PFKLP17858 780 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms