RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 CFAP54Q96N23 3096 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 ZNF840PA6NDX5 716 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 OLFM2O95897 454 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 OAS1P00973 400 aaKnown RBP9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 P4HA1P13674 534 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 ARSAP15289 507 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 DDX6P26196 483 aaKnown RBP eCLIP9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 ADORA2BP29275 332 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 AVPR1AP37288 418 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 FMO5P49326 533 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 SLC5A3P53794 718 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 RAD23BP54727 409 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 ZNF268Q14587 947 aaPredicted RBP9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 ANGPT1Q15389 498 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 ARHGAP29Q52LW3 1261 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 ZNF394Q53GI3 561 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 NAIF1Q69YI7 327 aaPredicted RBP9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 FOXR2Q6PJQ5 311 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CLEC20AQ6ZU45 233 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 FILIP1Q7Z7B0 1213 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 LAPTM4BQ86VI4 370 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 TRIM59Q8IWR1 403 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 SLC4A11Q8NBS3 891 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 LMO3Q8TAP4 145 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 KAT5Q92993 513 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CLDN23Q96B33 292 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 SMARCD1Q96GM5 515 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 SHDQ96IW2 340 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 TNIP3Q96KP6 325 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CEP295NLQ96MC4 621 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CEP63Q96MT8 703 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 HNRNPABQ99729 332 aaKnown RBP9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 PRRX2Q99811 253 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 MED10Q9BTT4 135 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 IMPG2Q9BZV3 1241 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CLSTN2Q9H4D0 955 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CYP3A43Q9HB55 503 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 CSNK1G1Q9HCP0 422 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 DMAP1Q9NPF5 467 aaPredicted RBP9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 GKN1Q9NS71 199 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 LMBRD1Q9NUN5 540 aa9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 NDRG2Q9UN36 371 aaKnown RBP9.05□□□□□ -0.96
HERPUD2-206ENST00000438224 RALGAPA1Q6GYQ0 2036 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 FAM92AA1XBS5 289 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 SOBPA7XYQ1 873 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 SPECC1L-ADORA2AF8WAN1 911 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 CKMP06732 381 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 ANXA13P27216 316 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 HOXC13P31276 330 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 MAP3K7CLP57077 242 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 LRMPQ12912 555 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 PAK1Q13153 545 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 STIM1Q13586 685 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 GAS6Q14393 721 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 MTF1Q14872 753 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 FRMD5Q7Z6J6 570 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 IRF2BP1Q8IU81 584 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 YAF2Q8IY57 180 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 NUP93Q8N1F7 819 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 SH3RF2Q8TEC5 729 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 WBP2Q969T9 261 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 ZFRQ96KR1 1074 aaKnown RBP9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 HINFPQ9BQA5 517 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 NT5C1AQ9BXI3 368 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 GTPBP4Q9BZE4 634 aaKnown RBP9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 OSBPL6Q9BZF3 934 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 EBF3Q9H4W6 596 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 CISHQ9NSE2 258 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 RBM12Q9NTZ6 932 aaKnown RBP9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 C2orf42Q9NWW7 574 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 GMIPQ9P107 970 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 WNT6Q9Y6F9 365 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 MYO15AQ9UKN7 3530 aa9.04□□□□□ -0.96
HERPUD2-206ENST00000438224 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 TRAV19A0A0A6YYK7 116 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 TULP2O00295 520 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 STX10O60499 249 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CALCAP01258 141 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 USP17L7P0C7H9 530 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ZDHHC11BP0C7U3 371 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CHRNB1P11230 501 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 HDCP19113 662 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 YWHAQP27348 245 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 PPP1R2P41236 205 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 MRE11P49959 708 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 SLC7A9P82251 487 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CUL2Q13617 745 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 PON2Q15165 354 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 GAB4Q2WGN9 574 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 DPCR1Q3MIW9 517 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 CCDC40Q4G0X9 1142 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ZNF852Q6ZMS4 543 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 Q6ZS52 159 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 C1orf210Q8IVY1 113 aa9.03□□□□□ -0.96
HERPUD2-206ENST00000438224 ARHGEF19Q8IW93 802 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms