RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ACLYP53396 1101 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 HDAC4P56524 1084 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 TNFAIP8L3Q5GJ75 292 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 RSAD2Q8WXG1 361 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 KCTD13Q8WZ19 329 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 UNC93B1Q9H1C4 597 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 MIOSQ9NXC5 875 aa26.83■■□□□ 1.89
CPNE1-216ENST00000437340 ACSL3O95573 720 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 IFNB1P01574 187 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 NPR3P17342 541 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 CD52P31358 61 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 EIF3EP60228 445 aaKnown RBP26.82■■□□□ 1.88
CPNE1-216ENST00000437340 DSC3Q14574 896 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 NOMO1Q15155 1222 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 RNASEH2BQ5TBB1 312 aaKnown RBP26.82■■□□□ 1.88
CPNE1-216ENST00000437340 LPPQ93052 612 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 RBM15Q96T37 977 aaKnown RBP eCLIP26.82■■□□□ 1.882e-7■■■□□ 15.1
CPNE1-216ENST00000437340 ZNF670Q9BS34 389 aa26.82■■□□□ 1.88
CPNE1-216ENST00000437340 CWC15Q9P013 229 aaKnown RBP26.82■■□□□ 1.88
CPNE1-216ENST00000437340 TLDC2A0PJX2 215 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 SMAPO00193 183 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 PECAM1P16284 738 aaPredicted RBP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 STIP1P31948 543 aaKnown RBP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 CDR1P51861 262 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 MMRN1Q13201 1228 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 KYNUQ16719 465 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 FAM26DQ5JW98 314 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 PIGZQ86VD9 579 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 UHMK1Q8TAS1 419 aaKnown RBP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 SPATA18Q8TC71 538 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 CLEC4CQ8WTT0 213 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 SERPINB12Q96P63 405 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 SNRNP25Q9BV90 132 aaKnown RBP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 PHACTR1Q9C0D0 580 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 PCDH18Q9HCL0 1135 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 SQORQ9Y6N5 450 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 A0A0U1RQF3 1178 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 DCDC2CA8MYV0 355 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 ABHD2P08910 425 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 RBP3P10745 1247 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 TGM2P21980 687 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 IL4RP24394 825 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 CLCNKBP51801 687 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 GUCY1A3Q02108 690 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 ERMARDQ5T6L9 678 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 STRADAQ7RTN6 431 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 EPS8L3Q8TE67 593 aaKnown RBP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 P3H4Q92791 437 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 FAF2Q96CS3 445 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 UBN1Q9NPG3 1134 aa26.81■■□□□ 1.88
CPNE1-216ENST00000437340 DDX43Q9NXZ2 648 aaKnown RBP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.81■■□□□ 1.88
CPNE1-216ENST00000437340 MYCP01106 439 aaPredicted RBP26.8■■□□□ 1.88
CPNE1-216ENST00000437340 SKIP12755 728 aa26.8■■□□□ 1.88
CPNE1-216ENST00000437340 LSP1P33241 339 aa26.8■■□□□ 1.88
CPNE1-216ENST00000437340 MAGEA4P43358 317 aa26.8■■□□□ 1.88
CPNE1-216ENST00000437340 SCNN1GP51170 649 aa26.8■■□□□ 1.88
CPNE1-216ENST00000437340 AFF1P51825 1210 aaKnown RBP26.8■■□□□ 1.88
CPNE1-216ENST00000437340 ITGA7Q13683 1181 aa26.8■■□□□ 1.88
CPNE1-216ENST00000437340 AUHQ13825 339 aaKnown RBP26.8■■□□□ 1.88
CPNE1-216ENST00000437340 PAQR9Q6ZVX9 377 aa26.8■■□□□ 1.88
CPNE1-216ENST00000437340 TTC25Q96NG3 672 aa26.8■■□□□ 1.88
CPNE1-216ENST00000437340 DNAJC17Q9NVM6 304 aaKnown RBP26.8■■□□□ 1.88
CPNE1-216ENST00000437340 FARP1Q9Y4F1 1045 aaPredicted RBP26.8■■□□□ 1.88
CPNE1-216ENST00000437340 MOXD2PA6NHM9 499 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 ATP2C2O75185 946 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 GHRP10912 638 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 PAX3P23760 479 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 GDF10P55107 478 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 HNRNPH2P55795 449 aaKnown RBP26.79■■□□□ 1.88
CPNE1-216ENST00000437340 LPIN1Q14693 890 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 MTFR1Q15390 333 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 DPYSL2Q16555 572 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 ANKRD20A8PQ5CZ79 823 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 SLC9A4Q6AI14 798 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 TTC19Q6DKK2 380 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-216ENST00000437340 DSTYKQ6XUX3 929 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 PGBD4Q96DM1 585 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 PWWP2AQ96N64 755 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 TSEN34Q9BSV6 310 aaKnown RBP26.79■■□□□ 1.88
CPNE1-216ENST00000437340 CALCOCO1Q9P1Z2 691 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 APOL1O14791 398 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 ACAT1P24752 427 aaKnown RBP26.79■■□□□ 1.88
CPNE1-216ENST00000437340 MATKP42679 507 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 UPP1Q16831 310 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 CCDC142Q17RM4 750 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 SKIDA1Q1XH10 827 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 TRIM71Q2Q1W2 868 aaKnown RBP26.79■■□□□ 1.88
CPNE1-216ENST00000437340 ZC3H12AQ5D1E8 599 aaKnown RBP26.79■■□□□ 1.88
CPNE1-216ENST00000437340 PPIL6Q8IXY8 311 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 PRCCQ92733 491 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-216ENST00000437340 SYT15Q9BQS2 421 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 NOD1Q9Y239 953 aa26.79■■□□□ 1.88
CPNE1-216ENST00000437340 MGEA5O60502 916 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 FAM200BP0CF97 657 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 ROR1Q01973 937 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 MDH1BQ5I0G3 518 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 CLEC20AQ6ZU45 233 aa26.78■■□□□ 1.88
CPNE1-216ENST00000437340 UNC45BQ8IWX7 931 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms