RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 MYRIPQ8NFW9 859 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 EPS8L3Q8TE67 593 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 PARD3BQ8TEW8 1205 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 C18orf25Q96B23 403 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ZMAT2Q96NC0 199 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 PPP1R10Q96QC0 940 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 FUCA2Q9BTY2 467 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 C11orf84Q9BUA3 381 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 IMPG2Q9BZV3 1241 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 MTMR12Q9C0I1 747 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 DEF6Q9H4E7 631 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 CWH43Q9H720 699 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 INTS13Q9NVM9 706 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 SPG21Q9NZD8 308 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 C6orf203Q9P0P8 240 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 STK39Q9UEW8 545 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 TUBGCP4Q9UGJ1 667 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 ITGA11Q9UKX5 1188 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 MTUS1Q9ULD2 1270 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 INTUQ9ULD6 942 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 PLAGL2Q9UPG8 496 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 AGAP1Q9UPQ3 857 aa6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 YBX2Q9Y2T7 364 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-208ENST00000436638 SF3B1O75533 1304 aaKnown RBP eCLIP6.57□□□□□ -1.368e-6■■■■■ 107
ECHDC1-208ENST00000436638 TMEM265A0A087WTH1 108 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 NT5C1B-RDH14C9J2C7 533 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 E2F6O75461 281 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 FGF18O76093 207 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 SERPINC1P01008 464 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 AFPP02771 609 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 ITGB3P05106 788 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 H2AFB1P0C5Y9 115 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 H2AFB2P0C5Z0 115 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TRIM49P0CI25 452 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TRIM49CP0CI26 452 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 P4HA1P13674 534 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 EEF1GP26641 437 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 POLR2BP30876 1174 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 HOXC13P31276 330 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 GCLMP48507 274 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TAF6P49848 677 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 MXI1P50539 228 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 CLCNKBP51801 687 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 GUCY2FP51841 1108 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 ERVK-21P61565 698 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 DLG4P78352 724 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 MYL7Q01449 175 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TAP1Q03518 808 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 PCDH1Q08174 1060 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 DSC1Q08554 894 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 GPM6BQ13491 265 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 ZBTB6Q15916 424 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 MAN2A1Q16706 1144 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 SV2CQ496J9 727 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 EPC2Q52LR7 807 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 HSP90AA4PQ58FG1 418 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 FKBP15Q5T1M5 1219 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 C9orf57Q5W0N0 161 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 KRT39Q6A163 491 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 KIAA1841Q6NSI8 718 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 ZCCHC8Q6NZY4 707 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TRAPPC11Q7Z392 1133 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 METTL23Q86XA0 190 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 CEP57Q86XR8 500 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 SLC39A11Q8N1S5 342 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 GABPB2Q8TAK5 448 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 HASPINQ8TF76 798 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 ARNTL2Q8WYA1 636 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TUBGCP2Q9BSJ2 902 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 C17orf80Q9BSJ5 609 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 CXCL16Q9H2A7 254 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 CERS4Q9HA82 394 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 RC3H2Q9HBD1 1191 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 GOLGA2P5Q9HBQ8 144 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 ARNT2Q9HBZ2 717 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 CBX8Q9HC52 389 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TMEM8AQ9HCN3 771 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 SAMSN1Q9NSI8 373 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 FANCLQ9NW38 375 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 DNAJB4Q9UDY4 337 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 SSX2IPQ9Y2D8 614 aa6.57□□□□□ -1.36
ECHDC1-208ENST00000436638 TMEM189-UBE2V1I3L0A0 370 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 P4HA2O15460 535 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 MEFVO15553 781 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 HUS1O60921 280 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 C4BPAP04003 597 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 URODP06132 367 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 TRIM21P19474 475 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 OAS2P29728 719 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 PBX3P40426 434 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 MAPK8P45983 427 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 FMO5P49326 533 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 TNNC1P63316 161 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 ZBED6P86452 979 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 UBE3AQ05086 875 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 SOX4Q06945 474 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 PPP3CAQ08209 521 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 UPP1Q16831 310 aa6.56□□□□□ -1.36
ECHDC1-208ENST00000436638 SGSM1Q2NKQ1 1148 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms