RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 FAM189A1O60320 539 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 MARCH8Q5T0T0 291 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 CCDC91Q7Z6B0 441 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 SLC13A1Q9BZW2 595 aa12.67□□□□□ -0.38
CLDN4-203ENST00000435050 MNAT1P51948 309 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 NT5DC4Q86YG4 428 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 USP33Q8TEY7 942 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 SERPINB12Q96P63 405 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 PITPNM3Q9BZ71 974 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ROPN1BQ9BZX4 212 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ROPN1Q9HAT0 212 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 KLHL14Q9P2G3 628 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 MEIS3P2A8K0S8 358 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 PAPSS1O43252 624 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 F2P00734 622 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 HOXA11P31270 313 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 CRYBB1P53674 252 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 SARNPP82979 210 aaKnown RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 GAD2Q05329 585 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 KIF9Q9HAQ2 790 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 STK38LQ9Y2H1 464 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 MYADML2A6NDP7 307 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 H0YGN5 161 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 AVILO75366 819 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 NUDT17P0C025 328 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 CA9Q16790 459 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 DENND5BQ6ZUT9 1274 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 BBS12Q6ZW61 710 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 KDELC2Q7Z4H8 507 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 CTU1Q7Z7A3 348 aaKnown RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 C12orf50Q8NA57 414 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 B3GALNT2Q8NCR0 500 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ATXN7L3BQ96GX2 97 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 NFS1Q9Y697 457 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 E2F8A0AVK6 867 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 APOC4-APOC2K7ER74 178 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 APOC2P02655 101 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 OR1G1P47890 313 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 MRPS6P82932 125 aaKnown RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 PKN2Q16513 984 aaKnown RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 EXOC3L1Q86VI1 746 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 TBCBQ99426 244 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ADAM2Q99965 735 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 SLC38A7Q9NVC3 462 aa12.66□□□□□ -0.38
CLDN4-203ENST00000435050 ZC3H7BQ9UGR2 993 aaKnown RBP12.66□□□□□ -0.38
CLDN4-203ENST00000435050 SUN1O94901 812 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 USP17L7P0C7H9 530 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 PTPN1P18031 435 aaKnown RBP12.65□□□□□ -0.38
CLDN4-203ENST00000435050 GRIK1P39086 918 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 ELK3P41970 407 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 BRCC3P46736 316 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 NDUFV1P49821 464 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 POU5F1BQ06416 359 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 SETDB1Q15047 1291 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 CST9Q5W186 159 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 CDKL3Q8IVW4 592 aaPredicted RBP12.65□□□□□ -0.38
CLDN4-203ENST00000435050 ULBP1Q9BZM6 244 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 NACA2Q9H009 215 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 TRPV2Q9Y5S1 764 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 TRPA1O75762 1119 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 ACADSBP45954 432 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 TPI1P60174 286 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 ITKQ08881 620 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 TCEAL1Q15170 157 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 ERMARDQ5T6L9 678 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 MAMDC4Q6UXC1 1216 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 PYROXD2Q8N2H3 581 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 ZCCHC9Q8N567 271 aaKnown RBP12.65□□□□□ -0.38
CLDN4-203ENST00000435050 KAT2BQ92831 832 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 PGM2Q96G03 612 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 NFKBIZQ9BYH8 718 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 KRT4P19013 534 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 DNAJC3Q13217 504 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 EFTUD2Q15029 972 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLDN4-203ENST00000435050 QPCTQ16769 361 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 LGSNQ5TDP6 509 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 LRRC52Q8N7C0 313 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 ANKRD52Q8NB46 1076 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 RNF157Q96PX1 679 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 MAGEB5Q9BZ81 275 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.38
CLDN4-203ENST00000435050 H3BRJ5 948 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 KCNK1O00180 336 aa12.64□□□□□ -0.39
CLDN4-203ENST00000435050 EEF2KO00418 725 aaKnown RBP12.64□□□□□ -0.39
CLDN4-203ENST00000435050 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms