RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 GBP2P32456 591 aaPredicted RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 SKIV2L2P42285 1042 aaKnown RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 MSH2P43246 934 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 ATP5OP48047 213 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 SLC6A3Q01959 620 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 GRB14Q14449 540 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 SLC9A4Q6AI14 798 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 TBC1D1Q86TI0 1168 aaPredicted RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 FAM228AQ86W67 206 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 LRRC52Q8N7C0 313 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 PLD5Q8N7P1 536 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 ANKLE1Q8NAG6 615 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 FAM172AQ8WUF8 416 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 ALKBH8Q96BT7 664 aaKnown RBP19.37■□□□□ 0.69
CLK1-205ENST00000434813 CYTH2Q99418 400 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 NCAPGQ9BPX3 1015 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 USP29Q9HBJ7 922 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 PCDH18Q9HCL0 1135 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 SNX9Q9Y5X1 595 aa19.37■□□□□ 0.69
CLK1-205ENST00000434813 APOL1O14791 398 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 MDM4O15151 490 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 NQO1P15559 274 aaKnown RBP19.36■□□□□ 0.69
CLK1-205ENST00000434813 SDC4P31431 198 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 ELK3P41970 407 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 GTF2A1P52655 376 aaPredicted RBP19.36■□□□□ 0.69
CLK1-205ENST00000434813 ATP11AP98196 1134 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 RIPK1Q13546 671 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 LVRNQ6Q4G3 990 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 ACOT1Q86TX2 421 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 ZDHHC17Q8IUH5 632 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 PQLC3Q8N755 202 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 STK32AQ8WU08 396 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 ZNF670Q9BS34 389 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 FRMD8Q9BZ67 464 aaPredicted RBP19.36■□□□□ 0.69
CLK1-205ENST00000434813 NGRNQ9NPE2 291 aaKnown RBP19.36■□□□□ 0.69
CLK1-205ENST00000434813 SLC5A4Q9NY91 659 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 TEX264Q9Y6I9 313 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 SCN1AP35498 2009 aa19.36■□□□□ 0.69
CLK1-205ENST00000434813 VGLL3A8MV65 326 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 ZNF487B1APH4 448 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 TM9SF1O15321 606 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 ATP6V1G2O95670 118 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 CCNB1P14635 433 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 DESP17661 470 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 YARSP54577 528 aaKnown RBP19.35■□□□□ 0.69
CLK1-205ENST00000434813 SNX16P57768 344 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 ZBTB6Q15916 424 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 DUSP28Q4G0W2 176 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 SLC27A1Q6PCB7 646 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 C1orf228Q6PIY5 440 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 SLC35F5Q8WV83 523 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 KHSRPQ92945 711 aaKnown RBP eCLIP19.35■□□□□ 0.695e-8■■■□□ 15.6
CLK1-205ENST00000434813 FAF2Q96CS3 445 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 ZMAT2Q96NC0 199 aaKnown RBP19.35■□□□□ 0.69
CLK1-205ENST00000434813 SNRNP25Q9BV90 132 aaKnown RBP19.35■□□□□ 0.69
CLK1-205ENST00000434813 ADAM33Q9BZ11 813 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 CXCL16Q9H2A7 254 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 ADAMTS10Q9H324 1103 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 SLCO1B3Q9NPD5 702 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 FAM49BQ9NUQ9 324 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 NME7Q9Y5B8 376 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 USH1CQ9Y6N9 552 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 TCRBV9S1A1TA0A576 114 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 MANSC4A6NHS7 340 aaPredicted RBP19.35■□□□□ 0.69
CLK1-205ENST00000434813 PPEF2O14830 753 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 SMPD1P17405 629 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 HOXA11P31270 313 aaPredicted RBP19.35■□□□□ 0.69
CLK1-205ENST00000434813 MTM1Q13496 603 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 KIZQ2M2Z5 673 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 ARHGAP17Q68EM7 881 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 ASRGL1Q7L266 308 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 UNC93AQ86WB7 457 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 IGDCC3Q8IVU1 814 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 BANPQ8N9N5 519 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 MAML3Q96JK9 1138 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 SNTG2Q9NY99 539 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 HESX1Q9UBX0 185 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 TUBGCP4Q9UGJ1 667 aa19.35■□□□□ 0.69
CLK1-205ENST00000434813 TRIP11Q15643 1979 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 BCLAF3A2AJT9 711 aaKnown RBP19.34■□□□□ 0.69
CLK1-205ENST00000434813 KBTBD13C9JR72 458 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 KCNN4O15554 427 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 PAPSS1O43252 624 aaPredicted RBP19.34■□□□□ 0.69
CLK1-205ENST00000434813 MAGEA6P43360 314 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 BCAR1P56945 870 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 KCNJ2P63252 427 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 SCYL2Q6P3W7 929 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 RASAL3Q86YV0 1011 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 BEST2Q8NFU1 509 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 PCDH19Q8TAB3 1148 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 KLHL29Q96CT2 875 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 ARHGEF3Q9NR81 526 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 GPATCH2LQ9NWQ4 482 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 CPA4Q9UI42 421 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 IGF2BP3O00425 579 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLK1-205ENST00000434813 DGKDQ16760 1214 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 OR6J1Q8NGC5 347 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 SLC44A1Q8WWI5 657 aa19.34■□□□□ 0.69
CLK1-205ENST00000434813 GCOM2Q9BZD3 368 aaPredicted RBP19.34■□□□□ 0.69
CLK1-205ENST00000434813 PNPLA8Q9NP80 782 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms