RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 BBS7Q8IWZ6 715 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 FAM186BQ8IYM0 893 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 ALLCQ8N6M5 410 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 C12orf50Q8NA57 414 aaPredicted RBP23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 CCDC26Q8TAB7 109 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 PNKPQ96T60 521 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 IMPG2Q9BZV3 1241 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 NACA2Q9H009 215 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 DUSP15Q9H1R2 295 aaPredicted RBP23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 CSNK1G1Q9HCP0 422 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 TBC1D14Q9P2M4 693 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 MMP17Q9ULZ9 603 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 SH3BP1Q9Y3L3 701 aa23.08■■□□□ 1.29
RPUSD3-206ENST00000433535 A0A1W2PQ27 194 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 A0A1W2PQ64 194 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 A0A1W2PQD8 194 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 FOXD2O60548 495 aaPredicted RBP23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 KAT7O95251 611 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 ZNF806P0C7X5 589 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 FAM200BP0CF97 657 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 CHRM1P11229 460 aaPredicted RBP23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 INCA1Q0VD86 236 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 NFIL3Q16649 462 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 TTC30AQ86WT1 665 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 GUF1Q8N442 669 aaKnown RBP23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 SCAND2PQ9GZW5 306 aaPredicted RBP23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 ZDHHC4Q9NPG8 344 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 ARHGEF4Q9NR80 690 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 COMMD8Q9NX08 183 aa23.07■■□□□ 1.28
RPUSD3-206ENST00000433535 TLR5O60602 858 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 KLF8O95600 359 aaPredicted RBP23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 APODP05090 189 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 KRT13P13646 458 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 HNRNPLP14866 589 aaKnown RBP eCLIP23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 CD58P19256 250 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 GBP1P32455 592 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 TIE1P35590 1138 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 EIF2DP41214 584 aaKnown RBP23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 ELF2Q15723 593 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 PPM1JQ5JR12 505 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 PLA2G2CQ5R387 149 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 EMC10Q5UCC4 262 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 TCEAL6Q6IPX3 200 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 CLEC20AQ6ZU45 233 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 SMYD4Q8IYR2 804 aaPredicted RBP23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 MDGA1Q8NFP4 955 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 TCEAL3Q969E4 200 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 NIF3L1Q9GZT8 377 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 FBXO44Q9H4M3 255 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 PCDHGA5Q9Y5G8 931 aa23.06■■□□□ 1.28
RPUSD3-206ENST00000433535 CYP26A1O43174 497 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 ZNF202O95125 648 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 KCNA4P22459 653 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 MRPS21P82921 87 aaKnown RBP23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 CRY1Q16526 586 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 ZCWPW2Q504Y3 356 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 TMEM92Q6UXU6 159 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 RASSF3Q86WH2 238 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 PHTF2Q8N3S3 785 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 NAT16Q8N8M0 369 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 IL17RCQ8NAC3 791 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 TXNDC5Q8NBS9 432 aaKnown RBP23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 OTUB2Q96DC9 234 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 EEF2KMTQ96G04 330 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 CNOT6LQ96LI5 555 aaKnown RBP23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 NT5C1AQ9BXI3 368 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 TLR8Q9NR97 1041 aaKnown RBP23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 ATP6V1DQ9Y5K8 247 aa23.05■■□□□ 1.28
RPUSD3-206ENST00000433535 HHLA1C9JL84 531 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 SGK1O00141 431 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 TBX18O95935 607 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 BCKDHBP21953 392 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 PSMC2P35998 433 aaKnown RBP23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 GRIA2P42262 883 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 CREB5Q02930 508 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 GAD2Q05329 585 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 ADAM9Q13443 819 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 WHAMMQ8TF30 809 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 CYFIP2Q96F07 1278 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 HNRNPABQ99729 332 aaKnown RBP23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 CYP3A43Q9HB55 503 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 OSER1Q9NX31 292 aa23.04■■□□□ 1.28
RPUSD3-206ENST00000433535 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 CILPO75339 1184 aa23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 RHOBTB1O94844 696 aa23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 TRIM21P19474 475 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 RPL13P26373 211 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 KIR2DL1P43626 348 aaPredicted RBP23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 ANO4Q32M45 955 aa23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 USP39Q53GS9 565 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 ETFBKMTQ8IXQ9 262 aa23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 TMEM8AQ9HCN3 771 aa23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 SPHK2Q9NRA0 654 aa23.03■■□□□ 1.28
RPUSD3-206ENST00000433535 ABCA7Q8IZY2 2146 aa23.02■■□□□ 1.28
RPUSD3-206ENST00000433535 MDM4O15151 490 aa23.02■■□□□ 1.28
RPUSD3-206ENST00000433535 HOXC11O43248 304 aaPredicted RBP23.02■■□□□ 1.28
RPUSD3-206ENST00000433535 TULP3O75386 442 aa23.02■■□□□ 1.28
RPUSD3-206ENST00000433535 ACO1P21399 889 aaKnown RBP23.02■■□□□ 1.28
RPUSD3-206ENST00000433535 LIMK1P53667 647 aa23.02■■□□□ 1.28
RPUSD3-206ENST00000433535 BECN1Q14457 450 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms