RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 KIAA1549LQ6ZVL6 1849 aa17.14■□□□□ 0.33
ACTB-205ENST00000432588 CHD8Q9HCK8 2581 aa17.14■□□□□ 0.33
ACTB-205ENST00000432588 LAMA1P25391 3075 aa17.14■□□□□ 0.33
ACTB-205ENST00000432588 EML5Q05BV3 1969 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 A0A0A0MRY4 1105 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 KLF8O95600 359 aaPredicted RBP17.13■□□□□ 0.33
ACTB-205ENST00000432588 ASS1P00966 412 aaKnown RBP17.13■□□□□ 0.33
ACTB-205ENST00000432588 ZDHHC11BP0C7U3 371 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 CCDC130P13994 396 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 TIE1P35590 1138 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 KDSRQ06136 332 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 LY6G5CQ5SRR4 150 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 PMS2CLQ68D20 193 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 CRYBG2Q8N1P7 616 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 IL17RCQ8NAC3 791 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 MDGA1Q8NFP4 955 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 ELMO3Q96BJ8 720 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 TLR8Q9NR97 1041 aaKnown RBP17.13■□□□□ 0.33
ACTB-205ENST00000432588 DEC1Q9P2X7 70 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 MYO16Q9Y6X6 1858 aa17.13■□□□□ 0.33
ACTB-205ENST00000432588 TM4SF5O14894 197 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 MAPK13O15264 365 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 HOXC11O43248 304 aaPredicted RBP17.12■□□□□ 0.33
ACTB-205ENST00000432588 TLR5O60602 858 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 HLA-DRAP01903 254 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 FAM200BP0CF97 657 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 SYKP43405 635 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 VAMP7P51809 220 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 KRT85P78386 507 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 ORC1Q13415 861 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 TCEAL6Q6IPX3 200 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 TRMT11Q7Z4G4 463 aaKnown RBP17.12■□□□□ 0.33
ACTB-205ENST00000432588 C12orf40Q86WS4 652 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 TXNDC5Q8NBS9 432 aaKnown RBP17.12■□□□□ 0.33
ACTB-205ENST00000432588 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 TCEAL3Q969E4 200 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 SPACA7Q96KW9 195 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 SMOQ99835 787 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 EDEM2Q9BV94 578 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 SPHK2Q9NRA0 654 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 BCCIPQ9P287 314 aaKnown RBP eCLIP17.12■□□□□ 0.33
ACTB-205ENST00000432588 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
ACTB-205ENST00000432588 TRAF3IP3Q9Y228 551 aa17.12■□□□□ 0.33
ACTB-205ENST00000432588 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 SGK1O00141 431 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 KHNYNO15037 678 aaKnown RBP17.11■□□□□ 0.33
ACTB-205ENST00000432588 BEST1O76090 585 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 IRF1P10914 325 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 KRT13P13646 458 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 KIR2DL1P43626 348 aaPredicted RBP17.11■□□□□ 0.33
ACTB-205ENST00000432588 ASPAP45381 313 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 MESP2Q0VG99 397 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 BYSLQ13895 437 aaKnown RBP17.11■□□□□ 0.33
ACTB-205ENST00000432588 ANO4Q32M45 955 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 SPOPLQ6IQ16 392 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 TMEM92Q6UXU6 159 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 INTS8Q75QN2 995 aaKnown RBP17.11■□□□□ 0.33
ACTB-205ENST00000432588 CYP2U1Q7Z449 544 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 SFTPA1Q8IWL2 248 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 BBS7Q8IWZ6 715 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 NAT16Q8N8M0 369 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 C12orf29Q8N999 325 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 ZMIZ2Q8NF64 920 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 KCNV2Q8TDN2 545 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 HMGXB4Q9UGU5 601 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 HPSEQ9Y251 543 aa17.11■□□□□ 0.33
ACTB-205ENST00000432588 CACNA1BQ00975 2339 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 ANTXRLA6NF34 631 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 MAP3K13O43283 966 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 NR2F2P24468 414 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
ACTB-205ENST00000432588 ADORA2BP29275 332 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 ATP5C1P36542 298 aaKnown RBP17.1■□□□□ 0.33
ACTB-205ENST00000432588 INCA1Q0VD86 236 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 NFIL3Q16649 462 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 LPCAT2Q7L5N7 544 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 ETFBKMTQ8IXQ9 262 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 HNRNPABQ99729 332 aaKnown RBP17.1■□□□□ 0.33
ACTB-205ENST00000432588 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
ACTB-205ENST00000432588 NT5C1AQ9BXI3 368 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 LSM7Q9UK45 103 aaKnown RBP17.1■□□□□ 0.33
ACTB-205ENST00000432588 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
ACTB-205ENST00000432588 TULP3O75386 442 aa17.09■□□□□ 0.33
ACTB-205ENST00000432588 BCKDHBP21953 392 aa17.09■□□□□ 0.33
ACTB-205ENST00000432588 DHPSP49366 369 aaPredicted RBP17.09■□□□□ 0.33
ACTB-205ENST00000432588 NDUFA8P51970 172 aa17.09■□□□□ 0.33
ACTB-205ENST00000432588 ENPEPQ07075 957 aa17.09■□□□□ 0.33
ACTB-205ENST00000432588 C1orf220Q5T0J3 134 aa17.09■□□□□ 0.33
ACTB-205ENST00000432588 EMC10Q5UCC4 262 aa17.09■□□□□ 0.33
ACTB-205ENST00000432588 DAB2IPQ5VWQ8 1189 aa17.09■□□□□ 0.33
ACTB-205ENST00000432588 HTR3DQ70Z44 454 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms