RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 UBE2TQ9NPD8 197 aaPredicted RBP16.06■□□□□ 0.16
PTCD1-204ENST00000430982 C2orf78A6NCI8 922 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 SOBPA7XYQ1 873 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 TNFRSF10BO14763 440 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 TM4SF5O14894 197 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 ZNF263O14978 683 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 PAPSS2O95340 614 aaPredicted RBP16.05■□□□□ 0.16
PTCD1-204ENST00000430982 CKMP06732 381 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 SLC9A1P19634 815 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 PTMSP20962 102 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 EEF1GP26641 437 aaKnown RBP16.05■□□□□ 0.16
PTCD1-204ENST00000430982 WEE1P30291 646 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 PPP3CCP48454 512 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 GAS6Q14393 721 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 GOLGA7BQ2TAP0 167 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 SGO2Q562F6 1265 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 RBBP8NLQ8NC74 664 aaPredicted RBP16.05■□□□□ 0.16
PTCD1-204ENST00000430982 TTC16Q8NEE8 873 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 USP13Q92995 863 aaPredicted RBP16.05■□□□□ 0.16
PTCD1-204ENST00000430982 KREMEN1Q96MU8 473 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 CYP2S1Q96SQ9 504 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 DUSP16Q9BY84 665 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 NDST4Q9H3R1 872 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 TAB2Q9NYJ8 693 aa16.05■□□□□ 0.16
PTCD1-204ENST00000430982 RALYQ9UKM9 306 aaKnown RBP16.05■□□□□ 0.16
PTCD1-204ENST00000430982 GREB1Q4ZG55 1949 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 TICRRQ7Z2Z1 1910 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 GTPBP10A4D1E9 387 aaKnown RBP16.04■□□□□ 0.16
PTCD1-204ENST00000430982 ZNF840PA6NDX5 716 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 HRO43593 1189 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 USP17L7P0C7H9 530 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 VDRP11473 427 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 KRT5P13647 590 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 CNR2P34972 360 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 MYL5Q02045 173 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 APBA1Q02410 837 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 KLHL40Q2TBA0 621 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 GJB7Q6PEY0 223 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 GPRIN1Q7Z2K8 1008 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 ARL14EPQ8N8R7 260 aaPredicted RBP16.04■□□□□ 0.16
PTCD1-204ENST00000430982 PDZD8Q8NEN9 1154 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 BPIFB1Q8TDL5 484 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 LRRC3BQ96PB8 259 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 TDP1Q9NUW8 608 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 FANCLQ9NW38 375 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 COMMD8Q9NX08 183 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 OBP2AQ9NY56 170 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 GMIPQ9P107 970 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 HESX1Q9UBX0 185 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 CHORDC1Q9UHD1 332 aaPredicted RBP16.04■□□□□ 0.16
PTCD1-204ENST00000430982 NDRG2Q9UN36 371 aaKnown RBP16.04■□□□□ 0.16
PTCD1-204ENST00000430982 CCL26Q9Y258 94 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 RALGAPA1Q6GYQ0 2036 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 PTPRDP23468 1912 aa16.04■□□□□ 0.16
PTCD1-204ENST00000430982 ZFYVE26Q68DK2 2539 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 HHLA1C9JL84 531 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 RNF225M0QZC1 329 aaPredicted RBP16.03■□□□□ 0.16
PTCD1-204ENST00000430982 PAEPP09466 180 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 CHRNB1P11230 501 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 HDCP19113 662 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 PON1P27169 355 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 PDE6CP51160 858 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 MFAP3P55082 362 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 SLC8A3P57103 927 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 SATB1Q01826 763 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 SIM2Q14190 667 aaPredicted RBP16.03■□□□□ 0.16
PTCD1-204ENST00000430982 ARHGAP44Q17R89 818 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 ANO6Q4KMQ2 910 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 N4BP2L1Q5TBK1 243 aaPredicted RBP16.03■□□□□ 0.16
PTCD1-204ENST00000430982 CDKAL1Q5VV42 579 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 PRR23BQ6ZRT6 265 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 OVCA2Q8WZ82 227 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 IRF7Q92985 503 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
PTCD1-204ENST00000430982 FBXO44Q9H4M3 255 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 KIF9Q9HAQ2 790 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 THG1LQ9NWX6 298 aaKnown RBP16.03■□□□□ 0.16
PTCD1-204ENST00000430982 IL37Q9NZH6 218 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 APEX2Q9UBZ4 518 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 KIAA1257Q9ULG3 409 aa16.03■□□□□ 0.16
PTCD1-204ENST00000430982 K7ESF4 209 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 ARNTLO00327 626 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 CHADO15335 359 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 CALCAP01258 141 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 TPM2P07951 284 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 BRD2P25440 801 aaKnown RBP16.02■□□□□ 0.16
PTCD1-204ENST00000430982 USP8P40818 1118 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 CXCL12P48061 93 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 BCAT1P54687 386 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 MLLT6P55198 1093 aaPredicted RBP16.02■□□□□ 0.16
PTCD1-204ENST00000430982 DMWDQ09019 674 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 FCHO2Q0JRZ9 810 aa16.02■□□□□ 0.16
PTCD1-204ENST00000430982 ZNF268Q14587 947 aaPredicted RBP16.02■□□□□ 0.16
PTCD1-204ENST00000430982 KRT31Q15323 416 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms