RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 PHF2O75151 1096 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 BEST1O76090 585 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 UPP2O95045 317 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 TJP3O95049 919 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 URODP06132 367 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 HAPLN1P10915 354 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 LCP1P13796 627 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 CPB1P15086 417 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 MIPP30301 263 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 GBP1P32455 592 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 HTR7P34969 479 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 RDXP35241 583 aaKnown RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 MARCKSL1P49006 195 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 SLC5A3P53794 718 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 TAS2R40P59535 323 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 LMNB2Q03252 620 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 UBE3AQ05086 875 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 SCAPQ12770 1279 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 BRD3Q15059 726 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 PSMD5Q16401 504 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 TEX35Q5T0J7 233 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 KIAA1841Q6NSI8 718 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 TRNP1Q6NT89 227 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 C8orf74Q6P047 294 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 SYDE1Q6ZW31 735 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 C16orf59Q7L2K0 433 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 BHLHA9Q7RTU4 235 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 MON1AQ86VX9 555 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 CEP57Q86XR8 500 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 HERC6Q8IVU3 1022 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 NUP93Q8N1F7 819 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 FIBCD1Q8N539 461 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 ARFGAP1Q8N6T3 406 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 EMC1Q8N766 993 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 PDZD8Q8NEN9 1154 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 FBXO22Q8NEZ5 403 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 BCL7CQ8WUZ0 217 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 HNRNPLLQ8WVV9 542 aaKnown RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 BADQ92934 168 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 PIWIL1Q96J94 861 aaKnown RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 SAMD11Q96NU1 681 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 CDK5RAP1Q96SZ6 601 aaKnown RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 ZNF670Q9BS34 389 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 TTLL2Q9BWV7 592 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 OSBPL8Q9BZF1 889 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 ULBP1Q9BZM6 244 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 LRRC19Q9H756 370 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 ABCC13Q9NSE7 274 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 OLA1Q9NTK5 396 aaKnown RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 RBM12Q9NTZ6 932 aaKnown RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 CLIC5Q9NZA1 410 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 PCYOX1Q9UHG3 505 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 IRAK3Q9Y616 596 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 MRPL42Q9Y6G3 142 aaKnown RBP9.48□□□□□ -0.89
NR1I3-209ENST00000428574 SLC4A7Q9Y6M7 1214 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 NLRC5Q86WI3 1866 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 PTPRDP23468 1912 aa9.48□□□□□ -0.89
NR1I3-209ENST00000428574 KIAA0100Q14667 2235 aaKnown RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 hCG_1818297A0A087WSY0 165 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 ZBBXA8MT70 800 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 NDC80O14777 642 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 ERLIN1O75477 346 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 ABLIM3O94929 683 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 GJB6O95452 261 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 TRUB2O95900 331 aaKnown RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 KRT1P04264 644 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 GRIK1P39086 918 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 CDKN2BP42772 138 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 PPP3CCP48454 512 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 NDUFV1P49821 464 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 CACNA2D1P54289 1103 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 HDAC4P56524 1084 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 RAB33AQ14088 237 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 TFDP2Q14188 446 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 SMC1AQ14683 1233 aaKnown RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 DPYSL2Q16555 572 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 CCNG2Q16589 344 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 SPOUT1Q5T280 376 aaKnown RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 MSANTD2Q6P1R3 559 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 POTEHQ6S545 545 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 BBS12Q6ZW61 710 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 CYP4V2Q6ZWL3 525 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 OTOP2Q7RTS6 562 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 TMEM173Q86WV6 379 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 ZNF461Q8TAF7 563 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 GRK7Q8WTQ7 553 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-209ENST00000428574 FAM149B1Q96BN6 582 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 FAF2Q96CS3 445 aa9.47□□□□□ -0.89
NR1I3-209ENST00000428574 MS4A14Q96JA4 679 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms