RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 SCAMP5Q8TAC9 235 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 KCNV2Q8TDN2 545 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 CYFIP2Q96F07 1278 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 GMIPQ9P107 970 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 LSM7Q9UK45 103 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 MMP17Q9ULZ9 603 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 MAPK8IP1Q9UQF2 711 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 SCML2Q9UQR0 700 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 RALGAPA1Q6GYQ0 2036 aa16.35■□□□□ 0.21
CTDSP1-202ENST00000428361 SLC30A4O14863 429 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 ATP5C1P36542 298 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 TNFRSF4P43489 277 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 PXNP49023 591 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 MXI1P50539 228 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 SLC8A3P57103 927 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 NUCB2P80303 420 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 AASDHQ4L235 1098 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 CNOT6LQ96LI5 555 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 GSDMAQ96QA5 445 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 SMOQ99835 787 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 MMRN2Q9H8L6 949 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 ARHGEF4Q9NR80 690 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 MYH10P35580 1976 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 ATG2BQ96BY7 2078 aa16.34■□□□□ 0.21
CTDSP1-202ENST00000428361 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 HOXC11O43248 304 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 CILPO75339 1184 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 KAT7O95251 611 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 ZNF806P0C7X5 589 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 ADORA2BP29275 332 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 LIMK1P53667 647 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 BYSLQ13895 437 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 ZCWPW2Q504Y3 356 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 C2orf27AQ580R0 203 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 C1orf220Q5T0J3 134 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 NAIF1Q69YI7 327 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 IL31Q6EBC2 164 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 KLHDC10Q6PID8 442 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 RHBDF2Q6PJF5 856 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 KBTBD6Q86V97 674 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 C12orf29Q8N999 325 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 FBXL13Q8NEE6 735 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 ZMIZ2Q8NF64 920 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 EZH1Q92800 747 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 ARRDC1-AS1Q9H2J1 176 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 CCSER2Q9H7U1 834 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 CYLDQ9NQC7 956 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 VPS45Q9NRW7 570 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 DEC1Q9P2X7 70 aa16.33■□□□□ 0.2
CTDSP1-202ENST00000428361 A0A0A0MRY4 1105 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 K7EQS6 105 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 SLC16A3O15427 465 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 ZBTB24O43167 697 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 RALAP11233 206 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 PPP1R2P41236 205 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 SEC13P55735 322 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 YWHAEP62258 255 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 PPP3CAQ08209 521 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 STIM1Q13586 685 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 CRY1Q16526 586 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 GAB4Q2WGN9 574 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 PLK5Q496M5 336 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 LY6G5CQ5SRR4 150 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 CLEC20AQ6ZU45 233 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 ARHGAP18Q8N392 663 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 ZFRQ96KR1 1074 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 SPACA7Q96KW9 195 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 GOLPH3LQ9H4A5 285 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 SPHK2Q9NRA0 654 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 RAB20Q9NX57 234 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 HMGXB4Q9UGU5 601 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
CTDSP1-202ENST00000428361 MED19A0JLT2 244 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 TBC1D3BA6NDS4 549 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 CD58P19256 250 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 GBP1P32455 592 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 MPLP40238 635 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 FKBP3Q00688 224 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 LRRC63Q05C16 580 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 ORC1Q13415 861 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 ANO4Q32M45 955 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 ZNF658Q5TYW1 1059 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 HTR3DQ70Z44 454 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 RASSF3Q86WH2 238 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 WHAMMQ8TF30 809 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 DUSP16Q9BY84 665 aa16.31■□□□□ 0.2
CTDSP1-202ENST00000428361 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms