RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 FBXO36Q8NEA4 188 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 TBC1D15Q8TC07 691 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 SREK1Q8WXA9 508 aaKnown RBP16.68■□□□□ 0.26
C9orf3-206ENST00000428313 HSPH1Q92598 858 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 FAM96AQ9H5X1 160 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 ARMC7Q9H6L4 198 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 PARVBQ9HBI1 364 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 CYP4F11Q9HBI6 524 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 EPS15L1Q9UBC2 864 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 MARCOQ9UEW3 520 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-206ENST00000428313 APOBEC2Q9Y235 224 aaKnown RBP16.68■□□□□ 0.26
C9orf3-206ENST00000428313 PNMA6FA0A0J9YX94 578 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 FAM47E-STBD1D6RA91 191 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 ITGAVP06756 1048 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 INHBAP08476 426 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 PABPC1P11940 636 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 CCT8P50990 548 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 MFAP3P55082 362 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 ESRRGP62508 458 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 CYP4A11Q02928 519 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 PDK1Q15118 436 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 CYTH1Q15438 398 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 MOGQ16653 247 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 C16orf87Q6PH81 154 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 ARCQ7LC44 396 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 MIER3Q7Z3K6 550 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 NUDCD3Q8IVD9 361 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 WDR75Q8IWA0 830 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 MYCT1Q8N699 235 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 PPP1R14CQ8TAE6 165 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 JDP2Q8WYK2 163 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 KAT5Q92993 513 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 C12orf43Q96C57 262 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 THAP11Q96EK4 314 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 WDR83Q9BRX9 315 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 TMEM117Q9H0C3 514 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 THAP1Q9NVV9 213 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 RNF11Q9Y3C5 154 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 TRIM64CA6NLI5 447 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 PSMD12O00232 456 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 TBX3O15119 743 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 AQP9O43315 295 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 STX3Q13277 289 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 RGS21Q2M5E4 152 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 MSS51Q4VC12 460 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 FNBP1LQ5T0N5 605 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 FBXO33Q7Z6M2 555 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 RHPN2Q8IUC4 686 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 MCOLN2Q8IZK6 566 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 SLC44A5Q8NCS7 719 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 DDX1Q92499 740 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 NKD2Q969F2 451 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 KREMEN1Q96MU8 473 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 EYA3Q99504 573 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 MECRQ9BV79 373 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 TDRD1Q9BXT4 1180 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 BCAS3Q9H6U6 928 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 PNPLA3Q9NST1 481 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 PRPF19Q9UMS4 504 aaKnown RBP16.67■□□□□ 0.26
C9orf3-206ENST00000428313 ARHGAP26Q9UNA1 814 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 SCINQ9Y6U3 715 aa16.67■□□□□ 0.26
C9orf3-206ENST00000428313 ABCA3Q99758 1704 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 A0A1B0GTW7 788 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 STAMBPO95630 424 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 NFX1Q12986 1120 aaKnown RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 RINT1Q6NUQ1 792 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 TMEM214Q6NUQ4 689 aaKnown RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 CDHR3Q6ZTQ4 885 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 CLVS1Q8IUQ0 354 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 TERB1Q8NA31 727 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 PCYOX1LQ8NBM8 494 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 ZNF420Q8TAQ5 688 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 DLG3Q92796 817 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 MAN1C1Q9NR34 630 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 NCKIPSDQ9NZQ3 722 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 EBF1Q9UH73 591 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 TTLL3Q9Y4R7 772 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 SPO11Q9Y5K1 396 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 SNX9Q9Y5X1 595 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 EIF3FO00303 357 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 XPO1O14980 1071 aaKnown RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 PFDN6O15212 129 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 NDST2P52849 883 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 TAS2R40P59535 323 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 PPP3CAQ08209 521 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 SMUG1Q53HV7 270 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 TTC39BQ5VTQ0 682 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 ZNF720Q7Z2F6 126 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 CARM1Q86X55 608 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 RCOR2Q8IZ40 523 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 GSDMBQ8TAX9 411 aa16.66■□□□□ 0.26
C9orf3-206ENST00000428313 TFB1MQ8WVM0 346 aaKnown RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 RMND5BQ96G75 393 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-206ENST00000428313 SERPINI1Q99574 410 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms